Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu0116	Atu0117	Atu0118	Atu0119	Atu0120
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.7	+0.5	-0.1	-5.5	+0.1
stress	Chloramphenicol 12.5 ug/mL	-0.6	-0.2	-0.1	-3.0	+0.6
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.5	+0.1	-2.6	-0.5
phage	AgroPhage_D04	-0.1	-0.2	-0.1	-2.2	-0.0
stress	Erythromycin 12.5 ug/mL	-0.1	+0.3	+0.1	-3.1	+0.3
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.3	+0.0	-2.5	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.3	+0.2	+0.2	-2.3	-0.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.0	-0.2	+0.1	-2.2	+0.1
carbon source	D-Saccharic potassium salt (C)	-0.1	-0.6	+0.0	-1.3	+0.1
nophagecontrol	No phage control	-0.2	-0.3	+0.1	-1.2	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.4	+0.1	-1.5	-0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.3	-0.1	-1.0	-0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.1	+0.2	-1.6	+0.0
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.5	-0.1	-1.1	-0.2
in planta	Bethi_Library_OD0.01	+0.1	+0.1	-0.1	-1.5	+0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.0	-0.3	+0.4	-1.3	+0.0
no phage	P1L4	-0.3	+0.4	-0.2	-1.2	+0.2
phage	AgroPhage_F03	+0.5	-0.2	+0.0	-1.0	-0.2
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.0	+0.3	+0.1	-1.4	+0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.5	+0.3	+0.2	-0.7
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.6	+0.6	+0.3	-1.0	-0.0
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.6	+0.5	+0.0	+0.6	+0.2
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.6	-0.1	+1.0	-0.3
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.2	-0.1	+1.7	-0.2
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.0	+0.6	+0.1	+1.0	-0.5
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days	-0.1	-0.1	+0.1	+2.1	-0.2
stress	Chloramphenicol 12.5 ug/mL	+0.5	+0.2	+0.0	+1.1	+0.4
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.5	+0.1	+1.4	+0.5
in planta	Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.2	+0.1	+2.5	+0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.4	+0.0	+0.0	+3.9	-0.2