Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0109 and Atu8081 are separated by 277 nucleotidesAtu8081 and Atu0110 are separated by 91 nucleotidesAtu0110 and Atu0111 are separated by 76 nucleotidesAtu0111 and Atu0112 are separated by 193 nucleotides Atu0109: Atu0109 - transcriptional regulator, MarR family, at 112,000 to 112,446 Atu0109 Atu8081: Atu8081 - hypothetical protein, at 112,724 to 113,134 Atu8081 Atu0110: Atu0110 - DNA polymerase I, at 113,226 to 116,222 Atu0110 Atu0111: Atu0111 - hypothetical protein, at 116,299 to 117,018 Atu0111 Atu0112: Atu0112 - 50S ribosomal protein L32, at 117,212 to 117,397 Atu0112
Group Condition Atu0109 Atu8081 Atu0110 Atu0111 Atu0112
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.5 -0.5 N.D. +0.3 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 -0.5 N.D. -0.1 N.D.
phage AgroPhage_A07 -0.6 -0.4 N.D. -0.3 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.9 +0.1 N.D. -0.5 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.9 -0.1 N.D. -0.2 N.D.
Atjh14 -1.0 +0.1 N.D. -0.2 N.D.
in planta Bethi_Library_OD0.05 -1.1 +0.1 N.D. +0.1 N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.6 +0.2 N.D. -0.4 N.D.
phage AgroPhage_D04 -0.9 -0.1 N.D. +0.2 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 +0.2 N.D. -0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 +0.2 N.D. -0.3 N.D.
carbon source D-Galacturonic Acid (C) -0.5 +0.3 N.D. -0.3 N.D.
nophagecontrol No phage control -0.8 +0.0 N.D. +0.5 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.9 +0.6 N.D. +0.1 N.D.
Atjh10 +0.6 -0.0 N.D. -0.6 N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.4 N.D. +0.5 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.2 N.D. +0.7 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.4 N.D. +0.3 N.D.
stress R2A with Vancomycin 0.009 mM +0.7 -0.3 N.D. +0.1 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.1 N.D. +1.0 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.6 N.D. +0.4 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.5 -0.3 N.D. +0.5 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.9 +0.0 N.D. -0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 -0.2 N.D. +0.2 N.D.
nitrogen source DL-2-Aminobutyric (N) -0.2 +0.9 N.D. +0.2 N.D.
stress Chloramphenicol 12.5 ug/mL +0.4 -0.2 N.D. +0.7 N.D.
phage AgroPhage_F04 +1.0 +0.1 N.D. +0.1 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.3 N.D. +0.4 N.D.
carbon source D-Saccharic potassium salt (C) +2.4 +0.2 N.D. -0.3 N.D.
carbon source D-Saccharic potassium salt (C) +2.5 +0.0 N.D. -0.1 N.D.
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