Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu0105	Atu0106	Atu0107	Atu0108	Atu0109
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-1.8	-0.2	-1.2	-0.0	-0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.0	+0.4	-2.5	+0.0	-0.9
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.7	-0.2	-0.8	+0.1	+0.1
stress	R2A with m-arsenite 0.8 mM	-1.7	-0.4	-0.3	+0.1	-0.1
stress	Erythromycin 12.5 ug/mL	-2.0	-0.6	+0.4	+0.1	-0.1
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.3	+0.3	-0.5	-0.2	-0.6
no phage	P2L5	-0.7	-0.7	-1.0	+0.1	+0.4
phage	AgroPhage_D04	+0.8	+0.2	-1.9	-0.2	-0.9
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.3	+0.2	+1.0	-0.1	-1.5
carbon source	D-Mannose (C)	+0.5	-1.2	-1.0	+0.1	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.9	-0.2	-1.1	+0.2	-0.9
phage	AgroPhage_F04	-0.7	+0.4	-1.2	+0.0	+1.0
carbon source	L-ascorbate (C)	+1.1	-0.9	-0.1	-0.1	-0.5
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.8	+0.9	+0.6	-0.1	-0.9
stress	R2A with Tetracycline 0.002 mM	+0.6	-1.5	+0.5	-0.1	+0.4
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.1	-0.1	+0.7	+0.1	+0.4
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.1	+0.8	+0.9	+0.0	-0.6
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.0	+0.9	+0.5	-0.1	-0.2
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.9	+0.4	-0.2	-1.0
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.8	+1.2	+0.5	-0.0	-0.2
	Atjh14	+0.6	+0.6	+0.4	+0.2	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.2	+0.5	+1.5	+0.1	-0.7
stress	Streptomycin 200 ug/mL	-0.0	+1.0	+0.9	-0.5	+0.1
carbon source	sarcosine (C)	-0.5	+2.0	+0.3	+0.0	+0.2
carbon source	D-Saccharic potassium salt (C)	-0.1	-0.4	+0.2	-0.1	+2.4
carbon source	D-Saccharic potassium salt (C)	+0.1	-0.5	+0.5	-0.1	+2.5
carbon source	methyl-beta-D-xylopyranoside (C)	+0.3	+0.4	+1.0	+0.2	+0.7
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+1.1	-0.1	+2.0	+0.3	-0.1
stress	R2A with Vancomycin 0.009 mM	-0.0	+4.1	+0.5	+0.1	-0.2
stress	R2A with Vancomycin 0.009 mM	-0.9	+4.1	+2.0	-0.1	+0.7