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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu0093 and Atu0094 are separated by 58 nucleotides
Atu0094 and Atu0095 are separated by 59 nucleotides
Atu0095 and Atu0096 are separated by 24 nucleotides
Atu0096 and Atu0097 are separated by 265 nucleotides
Atu0093: Atu0093 - Recombination protein, at 97,808 to 98,413
Atu0093
Atu0094: Atu0094 - hypothetical protein, at 98,472 to 99,086
Atu0094
Atu0095: Atu0095 - hypothetical protein, at 99,146 to 99,469
Atu0095
Atu0096: Atu0096 - DNA polymerase III, tau subunit, at 99,494 to 101,368
Atu0096
Atu0097: Atu0097 - hypothetical protein, at 101,634 to 102,038
Atu0097
Group
Condition
Atu0093
Atu0094
Atu0095
Atu0096
Atu0097
stress
R2A with Nitrofurantoin 0.4 mg/mL
-4.4
-0.0
-0.2
N.D.
-0.2
stress
R2A with Cisplatin 0.0016 mM
-4.7
+0.1
+0.3
N.D.
-0.0
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-3.9
-0.1
-0.3
N.D.
-0.0
stress
R2A with Cisplatin 0.0016 mM
-4.4
+0.0
-0.0
N.D.
+0.2
stress
R2A with Vancomycin 0.009 mM
-0.3
+0.0
+0.5
N.D.
-4.5
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-3.6
+0.1
-0.2
N.D.
-0.1
stress
R2A with Nitrofurantoin 0.4 mg/mL
-3.7
+0.1
-0.0
N.D.
+0.0
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-3.6
-0.2
+0.9
N.D.
-0.3
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-3.3
-0.1
+0.3
N.D.
+0.2
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-2.4
-0.2
-0.5
N.D.
+0.2
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-3.4
+0.0
+0.4
N.D.
+0.2
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-1.9
-0.5
-0.1
N.D.
-0.2
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-3.2
-0.2
+0.7
N.D.
+0.1
stress
R2A with Vancomycin 0.009 mM
+0.0
-0.2
+1.0
N.D.
-3.3
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-2.7
-0.1
+0.2
N.D.
+0.2
carbon source
L-ascorbate (C)
-1.2
+0.1
-0.1
N.D.
-1.1
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days
-2.1
-0.2
-0.0
N.D.
+0.2
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-2.2
+0.1
+0.0
N.D.
-0.1
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-3.2
+0.1
+0.7
N.D.
+0.3
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-2.2
-0.1
+0.3
N.D.
-0.0
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-2.5
+0.1
+0.4
N.D.
+0.1
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-2.0
-0.2
+0.4
N.D.
+0.3
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-1.9
-0.3
+0.5
N.D.
+0.1
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-2.2
-0.0
+0.5
N.D.
+0.4
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-1.6
+0.4
-0.5
N.D.
+0.4
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days
-2.1
-0.1
+0.5
N.D.
+0.5
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-1.4
+0.3
-0.5
N.D.
+0.5
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-1.8
+0.2
+0.4
N.D.
+0.2
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-1.8
-0.0
+0.3
N.D.
+0.4
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-2.1
+0.0
+1.0
N.D.
+0.4
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