Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu0061 and Atu0062 are separated by 49 nucleotidesAtu0062 and Atu0063 are separated by 264 nucleotidesAtu0063 and Atu0064 are separated by 224 nucleotidesAtu0064 and Atu0065 overlap by 1 nucleotides Atu0061: Atu0061 - ATP-dependent DNA helicase, at 63,196 to 65,004 Atu0061 Atu0062: Atu0062 - transcriptional regulator, ROK family, at 65,054 to 66,286 Atu0062 Atu0063: Atu0063 - ABC transporter, substrate binding protein (sugar), at 66,551 to 67,573 Atu0063 Atu0064: Atu0064 - ABC transporter, membrane spanning protein (sugar), at 67,798 to 68,880 Atu0064 Atu0065: Atu0065 - ABC transporter, nucleotide binding/ATPase protein (sugar), at 68,880 to 69,662 Atu0065
Group Condition Atu0061 Atu0062 Atu0063 Atu0064 Atu0065
carbon source D-Fructose (C) +0.0 +0.5 -7.6 -5.6 -5.6
carbon source D-Fructose (C) +0.1 +0.4 -4.0 -5.3 -5.8
carbon source L-Xylose (C) -0.0 -4.6 -0.3 -0.1 -0.2
carbon source L-Xylose (C) -0.0 -4.3 -0.1 +0.2 +0.1
carbon source Dihydroxyacetone (C) -0.1 -4.8 +0.5 +0.1 +0.2
carbon source D-Ribose (C) +0.0 -2.4 -0.3 -0.6 -0.6
carbon source Dihydroxyacetone (C) -0.1 -4.7 +0.5 +0.1 +0.2
carbon source D-Galacturonic Acid (C) +0.1 -4.1 -0.2 +0.2 +0.2
carbon source D-Ribose (C) -0.0 -2.2 -0.4 -0.5 -0.7
carbon source D-Galacturonic Acid (C) +0.0 -4.0 +0.1 +0.2 -0.0
carbon source L-ascorbate (C) -0.0 -3.4 -0.0 -0.3 +0.1
carbon source NAG (C) +0.1 -3.9 +0.1 +0.0 +0.1
carbon source L-Sorbose (C) -0.0 -6.4 +1.4 +0.8 +0.8
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -1.7 -0.5 -0.5 -0.3
carbon source D-Mannose (C) +0.1 -1.4 -0.3 -0.8 -0.8
carbon source L-Fucose (C) +0.0 -3.6 +0.0 +0.2 +0.2
carbon source D-Mannose (C) +0.1 -1.1 -0.6 -0.8 -0.7
carbon source L-Fucose (C) +0.0 -3.4 -0.1 +0.3 +0.2
carbon source m-Inositol (C) -0.0 -3.1 +0.0 -0.1 +0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -1.6 -0.6 -0.7 +0.3
carbon source NAG (C) +0.2 -3.3 -0.1 +0.3 +0.1
carbon source m-Inositol (C) +0.1 -2.9 +0.2 -0.1 +0.1
stress R2A with m-arsenite 0.8 mM -0.2 -3.6 +0.3 +0.5 +0.4
stress R2A with m-arsenite 0.8 mM -0.1 -3.6 +0.5 +0.6 +0.3
carbon source Xylobiose (C) -0.0 -2.5 +0.5 +0.1 +0.1
carbon source L-(+)-Erythrulose (C) -0.1 -2.7 +0.6 +0.2 +0.2
carbon source L-(+)-Erythrulose (C) +0.2 -2.4 +0.6 -0.1 +0.0
carbon source L-Sorbose (C) +0.1 -6.3 +2.2 +1.6 +1.6
carbon source Xylitol (C) +0.2 +10.6 -2.6 -2.3 -2.3
carbon source Xylitol (C) +0.2 +11.7 -2.0 -3.1 -2.8
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