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Cofit
Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS21700 and AMB_RS24715 are separated by 56 nucleotides
AMB_RS24715 and AMB_RS24720 are separated by 5 nucleotides
AMB_RS24720 and AMB_RS21705 are separated by 12 nucleotides
AMB_RS21705 and AMB_RS21710 are separated by 140 nucleotides
AMB_RS21700: AMB_RS21700 - hypothetical protein, at 4,697,640 to 4,697,933
_RS21700
AMB_RS24715: AMB_RS24715 - hypothetical protein, at 4,697,990 to 4,698,847
_RS24715
AMB_RS24720: AMB_RS24720 - GGDEF domain-containing protein, at 4,698,853 to 4,699,536
_RS24720
AMB_RS21705: AMB_RS21705 - site-specific integrase, at 4,699,549 to 4,700,115
_RS21705
AMB_RS21710: AMB_RS21710 - hypothetical protein, at 4,700,256 to 4,700,459
_RS21710
Group
Condition
AMB
_RS21700
AMB
_RS24715
AMB
_RS24720
AMB
_RS21705
AMB
_RS21710
carbon source
carbonsource_succinate
-0.2
-0.8
-0.5
-0.3
-0.2
magnetic pulldown
30_nonmag_1
-0.1
-0.1
-0.0
-0.2
-0.4
magnetic pulldown
150_initial_2
-0.1
-0.3
+0.0
-0.3
-0.3
magnetic pulldown
150_initial_1
+0.2
-0.2
+0.1
-0.3
-0.7
magnetic pulldown
30_initial_3
-0.0
-0.0
+0.0
-0.4
-0.3
magnetic pulldown
150_mag_3
-0.1
+0.1
-0.0
-0.3
-0.2
magnetic pulldown
30_initial_2
+0.1
-0.0
+0.2
-0.4
-0.2
magnetic pulldown
150_initial_3
+0.6
-0.1
-0.1
-0.2
-0.4
magnetic pulldown
150_nonmag_1
+0.5
+0.2
+0.4
-0.7
-0.6
magnetic pulldown
without_iron3
+0.2
+0.1
+0.1
-0.2
-0.4
magnetic pulldown
30_mag_3
+0.0
+0.3
+0.1
-0.0
-0.4
magnetic pulldown
30_nonmag_3
+0.2
+0.3
+0.4
-0.4
-0.3
magnetic pulldown
30_nonmag_2
-0.2
+0.5
+0.7
-0.7
-0.1
magnetic pulldown
150_nonmag_3
+0.2
+0.4
+0.6
-0.7
-0.3
magnetic pulldown
30_initial_1
+0.6
+0.0
+0.2
-0.4
-0.1
magnetic pulldown
30_mag_2
+0.4
+0.1
+0.2
-0.1
+0.2
magnetic pulldown
150_an_nonmag_2
+0.1
+0.6
+0.5
+0.1
-0.4
magnetic pulldown
30_an_initial_3
+0.1
+0.6
+0.5
-0.0
-0.0
magnetic pulldown
30_an_initial_2
+0.1
+0.7
+0.5
-0.2
+0.2
magnetic pulldown
30_an_nonmag_2
+0.2
+0.8
+0.7
-0.3
-0.1
magnetic pulldown
30_an_initial_1
+0.2
+0.6
+0.6
-0.1
-0.0
magnetic pulldown
30_an_mag_3
-0.1
+0.6
+0.5
-0.0
+0.6
magnetic pulldown
150_an_nonmag_1
+0.7
+1.2
+0.9
+0.1
-1.0
magnetic pulldown
an_mag_3
-0.1
+0.5
+0.8
+0.0
+0.8
magnetic pulldown
30_an_mag_1
-0.0
+0.7
+0.6
+0.2
+0.5
magnetic pulldown
30_an_mag_2
-0.0
+0.8
+0.7
+0.1
+0.5
carbon source
carbonsource_all
+1.1
+1.2
+1.3
-0.0
-0.7
magnetic pulldown
30_an_nonmag_3
+0.3
+1.7
+1.5
-0.3
-0.2
magnetic pulldown
150_nonmag_2
+1.1
+1.3
+1.5
-0.4
+0.0
magnetic pulldown
30_an_nonmag_1
+0.9
+2.3
+1.9
+0.2
-0.2
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