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Cofit
Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS19070 and AMB_RS19075 are separated by 43 nucleotides
AMB_RS19075 and AMB_RS24680 are separated by 135 nucleotides
AMB_RS24680 and AMB_RS19080 are separated by 1082 nucleotides
AMB_RS19080 and AMB_RS19085 are separated by 176 nucleotides
AMB_RS19070: AMB_RS19070 - hypothetical protein, at 4,144,544 to 4,145,887
_RS19070
AMB_RS19075: AMB_RS19075 - site-specific integrase, at 4,145,931 to 4,146,497
_RS19075
AMB_RS24680: AMB_RS24680 - hypothetical protein, at 4,146,633 to 4,146,842
_RS24680
AMB_RS19080: AMB_RS19080 - hypothetical protein, at 4,147,925 to 4,148,218
_RS19080
AMB_RS19085: AMB_RS19085 - hypothetical protein, at 4,148,395 to 4,148,940
_RS19085
Group
Condition
AMB
_RS19070
AMB
_RS19075
AMB
_RS24680
AMB
_RS19080
AMB
_RS19085
magnetic pulldown
150_an_nonmag_1
-0.6
-0.2
-6.1
+0.0
+0.6
magnetic pulldown
30_an_nonmag_1
-0.3
-0.8
-1.9
-0.1
+0.3
magnetic pulldown
30_an_nonmag_2
-0.4
-0.3
-2.2
+0.0
+0.4
carbon source
carbonsource_succinate
-0.1
-0.5
-0.9
-0.2
-0.2
magnetic pulldown
30_nonmag_3
-0.1
-0.2
-0.9
-0.4
-0.1
magnetic pulldown
150_nonmag_2
-0.1
-0.6
-0.5
-0.3
-0.1
magnetic pulldown
30_nonmag_2
-0.2
-0.7
-0.5
+0.0
-0.2
magnetic pulldown
30_an_initial_1
-0.2
-0.0
-1.5
+0.2
+0.1
magnetic pulldown
30_initial_2
-0.2
-0.3
-0.4
-0.3
-0.2
magnetic pulldown
150_initial_1
-0.2
-0.3
-0.6
-0.3
+0.0
magnetic pulldown
150_initial_2
-0.1
-0.4
-0.1
-0.5
-0.1
magnetic pulldown
30_an_nonmag_3
-0.5
-0.1
-0.9
-0.1
+0.5
magnetic pulldown
30_nonmag_1
-0.2
-0.3
-0.7
+0.1
-0.0
magnetic pulldown
30_initial_3
-0.1
-0.1
-0.7
-0.2
+0.0
magnetic pulldown
150_nonmag_1
-0.3
-0.4
-0.3
-0.1
+0.1
magnetic pulldown
30_initial_1
-0.1
-0.4
-0.3
-0.2
+0.0
magnetic pulldown
150_mag_1
-0.0
-0.2
-0.8
+0.1
-0.0
magnetic pulldown
30_an_initial_3
-0.3
+0.0
-0.8
+0.1
+0.1
magnetic pulldown
an_mag_3
-0.0
+0.2
-1.4
+0.5
-0.1
magnetic pulldown
150_initial_3
-0.1
-0.3
-0.2
-0.0
-0.1
magnetic pulldown
150_nonmag_3
-0.2
-0.3
-0.1
-0.2
+0.1
magnetic pulldown
150_an_nonmag_2
-0.3
+0.3
-0.6
-0.3
+0.4
carbon source
carbonsource_all
-0.0
-0.1
-0.5
+0.2
-0.0
magnetic pulldown
30_an_initial_2
-0.1
+0.2
-0.3
+0.2
+0.1
magnetic pulldown
30_an_mag_3
+0.0
+0.2
-0.5
+0.2
+0.2
magnetic pulldown
150_an_nonmag_3
-0.2
-0.0
-0.2
+0.2
+0.5
magnetic pulldown
30_mag_3
+0.2
+0.2
+0.4
+0.0
+0.0
magnetic pulldown
30_mag_2
+0.2
+0.2
+0.5
+0.0
+0.1
magnetic pulldown
30_an_mag_1
-0.1
+0.3
+0.2
+0.3
+0.3
magnetic pulldown
30_an_mag_2
+0.2
+0.4
+0.2
+0.5
+0.3
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AMB_RS19070
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AMB_RS19075
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AMB_RS24680
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AMB_RS19080
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AMB_RS19085
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