Fitness for 5 genes in Magnetospirillum magneticum AMB-1

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Top 30 experiments (either direction), sorted by average fitness

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500 ntAMB_RS22340 and AMB_RS22345 are separated by 94 nucleotidesAMB_RS22345 and AMB_RS22350 are separated by 12 nucleotidesAMB_RS22350 and AMB_RS22355 overlap by 4 nucleotidesAMB_RS22355 and AMB_RS22360 are separated by 88 nucleotides AMB_RS22340: AMB_RS22340 - DNA mismatch repair protein MutL, at 4,822,942 to 4,824,765 _RS22340 AMB_RS22345: AMB_RS22345 - hemerythrin domain-containing protein, at 4,824,860 to 4,825,279 _RS22345 AMB_RS22350: AMB_RS22350 - transcription elongation factor GreB, at 4,825,292 to 4,825,840 _RS22350 AMB_RS22355: AMB_RS22355 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 4,825,837 to 4,826,880 _RS22355 AMB_RS22360: AMB_RS22360 - hydroxymethylbilane synthase, at 4,826,969 to 4,827,916 _RS22360
Group Condition AMB_RS22340 AMB_RS22345 AMB_RS22350 AMB_RS22355 AMB_RS22360
magnetic pulldown 150_nonmag_3 +0.0 -0.3 -0.5 N.D. N.D.
magnetic pulldown an_mag_3 -0.3 -0.5 +0.2 N.D. N.D.
carbon source carbonsource_all -0.3 -0.3 -0.0 N.D. N.D.
magnetic pulldown 30_an_mag_1 -0.1 -0.1 -0.5 N.D. N.D.
magnetic pulldown 30_nonmag_2 +0.0 -0.3 -0.3 N.D. N.D.
magnetic pulldown 150_mag_1 -0.3 -0.2 -0.1 N.D. N.D.
magnetic pulldown without_iron3 -0.0 -0.3 -0.1 N.D. N.D.
magnetic pulldown 30_an_mag_2 +0.1 -0.1 -0.5 N.D. N.D.
magnetic pulldown 30_an_initial_1 +0.1 -0.1 -0.4 N.D. N.D.
magnetic pulldown 30_an_initial_3 +0.1 -0.2 -0.4 N.D. N.D.
magnetic pulldown 30_an_initial_2 +0.2 -0.2 -0.4 N.D. N.D.
magnetic pulldown 30_an_nonmag_2 +0.2 -0.2 -0.4 N.D. N.D.
magnetic pulldown 30_an_nonmag_3 +0.4 -0.5 -0.4 N.D. N.D.
magnetic pulldown 150_mag_2 -0.2 -0.1 -0.1 N.D. N.D.
magnetic pulldown 30_an_mag_3 +0.0 +0.1 -0.5 N.D. N.D.
magnetic pulldown 150_an_nonmag_2 +0.4 -0.0 -0.7 N.D. N.D.
magnetic pulldown without_iron1 -0.1 -0.0 -0.2 N.D. N.D.
magnetic pulldown 150_initial_1 -0.1 +0.1 -0.3 N.D. N.D.
magnetic pulldown 30_mag_3 -0.3 +0.1 -0.0 N.D. N.D.
magnetic pulldown 30_initial_1 -0.1 -0.2 +0.2 N.D. N.D.
magnetic pulldown 30_initial_3 -0.1 +0.2 -0.2 N.D. N.D.
carbon source carbonsource_succinate -0.2 +0.2 -0.2 N.D. N.D.
magnetic pulldown 150_an_nonmag_3 +0.3 +0.2 -0.6 N.D. N.D.
magnetic pulldown 150_nonmag_1 -0.0 +0.2 -0.2 N.D. N.D.
magnetic pulldown 150_nonmag_2 +0.4 +0.0 -0.4 N.D. N.D.
magnetic pulldown 150_initial_3 -0.2 +0.1 +0.1 N.D. N.D.
magnetic pulldown without_iron2 -0.1 +0.1 +0.1 N.D. N.D.
magnetic pulldown 30_nonmag_1 +0.1 +0.1 -0.1 N.D. N.D.
magnetic pulldown 30_an_nonmag_1 +0.5 +0.4 -0.1 N.D. N.D.
magnetic pulldown 150_an_nonmag_1 +0.4 +0.5 -0.0 N.D. N.D.
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AMB_RS22340
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AMB_RS22345
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AMB_RS22355
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AMB_RS22360
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