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Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS21005 and AMB_RS21010 are separated by 104 nucleotides
AMB_RS21010 and AMB_RS21015 overlap by 4 nucleotides
AMB_RS21015 and AMB_RS21020 are separated by 7 nucleotides
AMB_RS21020 and AMB_RS21025 are separated by 87 nucleotides
AMB_RS21005: AMB_RS21005 - hypothetical protein, at 4,561,343 to 4,561,762
_RS21005
AMB_RS21010: AMB_RS21010 - response regulator, at 4,561,867 to 4,562,238
_RS21010
AMB_RS21015: AMB_RS21015 - chemotaxis protein CheC, at 4,562,235 to 4,562,855
_RS21015
AMB_RS21020: AMB_RS21020 - bifunctional diguanylate cyclase/phosphodiesterase, at 4,562,863 to 4,565,364
_RS21020
AMB_RS21025: AMB_RS21025 - DUF3422 domain-containing protein, at 4,565,452 to 4,566,732
_RS21025
Group
Condition
AMB
_RS21005
AMB
_RS21010
AMB
_RS21015
AMB
_RS21020
AMB
_RS21025
magnetic pulldown
30_an_nonmag_1
-3.9
+0.2
+0.3
+0.0
-1.1
magnetic pulldown
30_an_nonmag_2
-4.3
-0.0
+0.1
+0.0
+0.0
magnetic pulldown
150_an_nonmag_2
-4.1
-0.1
+0.2
-0.1
+0.3
magnetic pulldown
an_mag_3
-2.2
-0.0
+0.2
-0.1
-1.4
magnetic pulldown
30_an_initial_2
-2.2
-0.0
+0.2
-0.1
-0.3
magnetic pulldown
150_an_nonmag_3
-2.7
+0.3
+0.1
+0.1
+0.2
magnetic pulldown
30_an_initial_1
-1.0
-0.1
+0.2
+0.0
-1.0
carbon source
carbonsource_succinate
+0.2
-0.1
-0.1
+0.1
-1.7
magnetic pulldown
150_nonmag_3
-1.2
-0.1
-0.1
+0.2
-0.3
magnetic pulldown
30_nonmag_3
-0.2
-0.1
-0.1
-0.2
-0.5
magnetic pulldown
150_nonmag_1
-0.1
-0.1
-0.2
-0.0
-0.6
magnetic pulldown
without_iron1
+0.1
-0.1
-0.2
-0.1
-0.6
magnetic pulldown
30_mag_2
-0.2
-0.1
-0.2
+0.0
-0.3
magnetic pulldown
150_initial_1
-0.4
-0.1
-0.1
-0.0
-0.2
magnetic pulldown
30_mag_1
-0.0
-0.4
-0.2
-0.0
-0.2
magnetic pulldown
30_mag_3
+0.1
-0.1
-0.3
+0.0
-0.3
magnetic pulldown
without_iron3
+0.1
-0.1
-0.1
+0.0
-0.4
magnetic pulldown
30_nonmag_1
+0.2
-0.1
-0.1
-0.1
-0.5
magnetic pulldown
30_an_initial_3
-0.3
-0.0
+0.1
-0.0
-0.3
magnetic pulldown
without_iron2
+0.1
-0.1
+0.1
-0.0
-0.5
magnetic pulldown
150_nonmag_2
-0.0
-0.0
-0.1
-0.3
+0.1
magnetic pulldown
30_nonmag_2
+0.0
+0.1
-0.1
+0.0
-0.3
magnetic pulldown
150_mag_1
+0.2
-0.2
-0.0
+0.1
-0.2
carbon source
carbonsource_all
-0.1
+0.2
-0.0
+0.1
-0.4
magnetic pulldown
30_initial_3
+0.3
-0.1
+0.1
+0.0
-0.3
magnetic pulldown
150_initial_2
+0.5
+0.1
-0.1
-0.2
-0.2
magnetic pulldown
30_an_mag_1
+0.8
-0.0
+0.2
+0.1
-0.9
magnetic pulldown
30_an_mag_3
+0.4
-0.0
+0.2
+0.1
-0.4
magnetic pulldown
30_an_nonmag_3
+0.5
+0.3
+0.2
-0.1
-0.6
magnetic pulldown
150_an_nonmag_1
+2.2
-0.1
+0.3
+0.0
-0.0
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