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Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS19660 and AMB_RS19665 are separated by 235 nucleotides
AMB_RS19665 and AMB_RS19670 are separated by 3 nucleotides
AMB_RS19670 and AMB_RS19675 overlap by 14 nucleotides
AMB_RS19675 and AMB_RS19680 are separated by 186 nucleotides
AMB_RS19660: AMB_RS19660 - quinolinate synthase NadA, at 4,293,706 to 4,294,692
_RS19660
AMB_RS19665: AMB_RS19665 - response regulator, at 4,294,928 to 4,295,362
_RS19665
AMB_RS19670: AMB_RS19670 - metal-transporting ATPase, at 4,295,366 to 4,297,975
_RS19670
AMB_RS19675: AMB_RS19675 - DNA-binding response regulator, at 4,297,962 to 4,298,621
_RS19675
AMB_RS19680: AMB_RS19680 - DUF952 domain-containing protein, at 4,298,808 to 4,299,197
_RS19680
Group
Condition
AMB
_RS19660
AMB
_RS19665
AMB
_RS19670
AMB
_RS19675
AMB
_RS19680
magnetic pulldown
150_an_nonmag_1
N.D.
N.D.
-1.0
-0.1
-0.2
magnetic pulldown
30_an_nonmag_2
N.D.
N.D.
-0.6
-0.5
+0.2
magnetic pulldown
150_an_nonmag_3
N.D.
N.D.
-0.1
-0.4
-0.3
magnetic pulldown
30_an_mag_3
N.D.
N.D.
-0.3
-0.1
+0.1
magnetic pulldown
30_an_initial_1
N.D.
N.D.
-0.2
-0.2
+0.1
magnetic pulldown
30_an_mag_1
N.D.
N.D.
-0.3
-0.0
+0.1
magnetic pulldown
30_an_nonmag_1
N.D.
N.D.
-0.2
-0.2
+0.3
magnetic pulldown
30_an_initial_3
N.D.
N.D.
-0.2
-0.1
+0.2
magnetic pulldown
30_an_initial_2
N.D.
N.D.
-0.1
+0.0
+0.2
magnetic pulldown
30_an_nonmag_3
N.D.
N.D.
+0.0
-0.3
+0.4
magnetic pulldown
150_mag_3
N.D.
N.D.
-0.2
+0.3
+0.0
magnetic pulldown
30_initial_3
N.D.
N.D.
-0.5
+0.5
+0.1
magnetic pulldown
without_iron2
N.D.
N.D.
-0.3
+0.4
+0.0
magnetic pulldown
150_initial_1
N.D.
N.D.
-0.2
+0.3
+0.0
magnetic pulldown
150_initial_3
N.D.
N.D.
-0.1
+0.3
+0.1
magnetic pulldown
150_mag_1
N.D.
N.D.
-0.1
+0.4
+0.1
magnetic pulldown
30_initial_1
N.D.
N.D.
+0.0
+0.3
+0.0
magnetic pulldown
30_initial_2
N.D.
N.D.
+0.2
+0.3
-0.0
magnetic pulldown
150_nonmag_2
N.D.
N.D.
-0.3
+0.9
-0.0
magnetic pulldown
150_mag_2
N.D.
N.D.
+0.0
+0.4
+0.1
magnetic pulldown
30_nonmag_1
N.D.
N.D.
+0.8
-0.1
-0.1
magnetic pulldown
an_mag_3
N.D.
N.D.
-0.0
+1.1
-0.5
magnetic pulldown
150_nonmag_1
N.D.
N.D.
+0.6
-0.1
+0.1
magnetic pulldown
30_mag_3
N.D.
N.D.
-0.1
+0.7
+0.2
magnetic pulldown
30_mag_2
N.D.
N.D.
+0.2
+0.5
+0.0
magnetic pulldown
30_nonmag_3
N.D.
N.D.
+0.5
+0.3
+0.0
magnetic pulldown
30_mag_1
N.D.
N.D.
+0.1
+0.5
+0.2
magnetic pulldown
150_nonmag_3
N.D.
N.D.
+1.0
+0.4
+0.1
carbon source
carbonsource_all
N.D.
N.D.
-0.4
+1.5
+0.5
magnetic pulldown
30_nonmag_2
N.D.
N.D.
+0.9
+0.6
+0.2
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