Fitness for 5 genes in Magnetospirillum magneticum AMB-1

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Top 30 experiments (either direction), sorted by average fitness

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500 ntAMB_RS19280 and AMB_RS19285 overlap by 1 nucleotidesAMB_RS19285 and AMB_RS19290 are separated by 158 nucleotidesAMB_RS19290 and AMB_RS19295 are separated by 207 nucleotidesAMB_RS19295 and AMB_RS19300 overlap by 4 nucleotides AMB_RS19280: AMB_RS19280 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 4,206,887 to 4,208,206 _RS19280 AMB_RS19285: AMB_RS19285 - GNAT family N-acetyltransferase, at 4,208,206 to 4,209,180 _RS19285 AMB_RS19290: AMB_RS19290 - tetratricopeptide repeat protein, at 4,209,339 to 4,211,114 _RS19290 AMB_RS19295: AMB_RS19295 - hypothetical protein, at 4,211,322 to 4,211,666 _RS19295 AMB_RS19300: AMB_RS19300 - threonine-phosphate decarboxylase, at 4,211,663 to 4,212,652 _RS19300
Group Condition AMB_RS19280 AMB_RS19285 AMB_RS19290 AMB_RS19295 AMB_RS19300
carbon source carbonsource_all +0.1 -0.2 -0.2 N.D. N.D.
magnetic pulldown 150_mag_1 -0.3 +0.0 +0.0 N.D. N.D.
magnetic pulldown 30_an_initial_3 -0.1 -0.1 +0.1 N.D. N.D.
magnetic pulldown 30_an_mag_2 -0.0 -0.2 +0.1 N.D. N.D.
magnetic pulldown 30_an_mag_1 -0.0 -0.2 +0.1 N.D. N.D.
magnetic pulldown an_mag_3 +0.0 +0.1 -0.2 N.D. N.D.
magnetic pulldown without_iron1 -0.1 +0.0 -0.1 N.D. N.D.
magnetic pulldown 30_an_mag_3 -0.1 -0.1 +0.1 N.D. N.D.
magnetic pulldown 150_initial_1 -0.1 +0.1 -0.0 N.D. N.D.
magnetic pulldown 150_mag_2 -0.1 +0.0 +0.1 N.D. N.D.
magnetic pulldown without_iron3 -0.0 +0.1 -0.1 N.D. N.D.
magnetic pulldown 30_an_initial_2 -0.1 +0.0 +0.1 N.D. N.D.
magnetic pulldown 150_mag_3 -0.1 +0.1 +0.1 N.D. N.D.
magnetic pulldown 30_mag_2 +0.0 -0.1 +0.2 N.D. N.D.
carbon source carbonsource_succinate +0.1 +0.1 -0.1 N.D. N.D.
magnetic pulldown 30_mag_3 +0.0 +0.1 -0.0 N.D. N.D.
magnetic pulldown without_iron2 +0.0 -0.0 +0.1 N.D. N.D.
magnetic pulldown 30_initial_1 +0.1 +0.1 +0.0 N.D. N.D.
magnetic pulldown 30_an_nonmag_2 +0.4 -0.1 -0.1 N.D. N.D.
magnetic pulldown 30_nonmag_3 +0.3 +0.2 -0.1 N.D. N.D.
magnetic pulldown 150_nonmag_3 +0.4 +0.1 -0.1 N.D. N.D.
magnetic pulldown 150_nonmag_1 +0.4 +0.1 -0.0 N.D. N.D.
magnetic pulldown 150_nonmag_2 +0.5 +0.3 -0.3 N.D. N.D.
magnetic pulldown 30_nonmag_1 +0.3 +0.2 +0.1 N.D. N.D.
magnetic pulldown 150_an_nonmag_3 +0.6 +0.0 -0.1 N.D. N.D.
magnetic pulldown 30_nonmag_2 +0.4 +0.3 -0.1 N.D. N.D.
magnetic pulldown 30_an_nonmag_1 +0.5 +0.0 +0.1 N.D. N.D.
magnetic pulldown 30_an_nonmag_3 +0.6 +0.1 +0.0 N.D. N.D.
magnetic pulldown 150_an_nonmag_1 +0.8 -0.1 -0.0 N.D. N.D.
magnetic pulldown 150_an_nonmag_2 +0.7 -0.1 +0.2 N.D. N.D.
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AMB_RS19280
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AMB_RS19285
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AMB_RS19295
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AMB_RS19300
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