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Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS19260 and AMB_RS19265 are separated by 101 nucleotides
AMB_RS19265 and AMB_RS19270 are separated by 200 nucleotides
AMB_RS19270 and AMB_RS19275 overlap by 23 nucleotides
AMB_RS19275 and AMB_RS19280 overlap by 1 nucleotides
AMB_RS19260: AMB_RS19260 - HAMP domain-containing protein, at 4,202,131 to 4,204,197
_RS19260
AMB_RS19265: AMB_RS19265 - RNA pseudouridine synthase, at 4,204,299 to 4,204,988
_RS19265
AMB_RS19270: AMB_RS19270 - spore coat polysaccharide biosynthesis protein F, at 4,205,189 to 4,205,920
_RS19270
AMB_RS19275: AMB_RS19275 - gfo/Idh/MocA family oxidoreductase, at 4,205,898 to 4,206,887
_RS19275
AMB_RS19280: AMB_RS19280 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 4,206,887 to 4,208,206
_RS19280
Group
Condition
AMB
_RS19260
AMB
_RS19265
AMB
_RS19270
AMB
_RS19275
AMB
_RS19280
magnetic pulldown
an_mag_3
-0.0
-0.9
+0.2
+0.1
+0.0
magnetic pulldown
150_mag_2
-0.1
-0.1
-0.2
-0.1
-0.1
magnetic pulldown
30_an_mag_2
+0.0
-0.1
-0.2
-0.2
-0.0
magnetic pulldown
150_initial_1
+0.0
-0.2
-0.2
+0.1
-0.1
magnetic pulldown
30_an_mag_3
-0.1
-0.1
-0.0
-0.1
-0.1
magnetic pulldown
150_mag_1
-0.0
+0.1
-0.2
-0.0
-0.3
magnetic pulldown
30_an_initial_3
+0.0
-0.3
+0.1
-0.0
-0.1
magnetic pulldown
150_mag_3
-0.0
+0.1
-0.2
-0.0
-0.1
magnetic pulldown
without_iron1
-0.1
-0.2
-0.1
+0.2
-0.1
magnetic pulldown
150_initial_3
-0.1
-0.0
-0.1
+0.1
-0.1
magnetic pulldown
30_mag_2
-0.0
-0.2
-0.1
+0.1
+0.0
magnetic pulldown
30_mag_3
-0.0
-0.2
-0.1
+0.1
+0.0
magnetic pulldown
30_initial_2
+0.0
-0.2
-0.0
+0.0
+0.1
magnetic pulldown
30_an_initial_2
+0.1
-0.1
-0.0
+0.1
-0.1
magnetic pulldown
without_iron2
-0.0
-0.2
+0.1
+0.2
+0.0
carbon source
carbonsource_succinate
-0.1
-0.1
-0.0
+0.2
+0.1
magnetic pulldown
150_initial_2
-0.0
+0.1
-0.1
+0.2
+0.0
magnetic pulldown
30_initial_1
-0.0
+0.1
+0.0
+0.2
+0.1
magnetic pulldown
30_nonmag_3
+0.0
-0.2
+0.2
+0.4
+0.3
magnetic pulldown
150_nonmag_3
-0.1
-0.2
+0.4
+0.3
+0.4
magnetic pulldown
30_an_nonmag_1
+0.4
-0.9
+0.3
+0.6
+0.5
magnetic pulldown
30_nonmag_1
+0.1
-0.0
+0.0
+0.5
+0.3
magnetic pulldown
30_nonmag_2
-0.1
+0.0
+0.3
+0.4
+0.4
magnetic pulldown
30_an_nonmag_2
+0.0
-0.4
+0.4
+0.7
+0.4
magnetic pulldown
150_nonmag_1
+0.0
+0.1
+0.2
+0.5
+0.4
magnetic pulldown
150_nonmag_2
+0.3
+0.1
+0.2
+0.4
+0.5
magnetic pulldown
30_an_nonmag_3
+0.1
-0.0
+0.4
+0.8
+0.6
magnetic pulldown
150_an_nonmag_2
+0.1
-0.5
+0.7
+1.2
+0.7
magnetic pulldown
150_an_nonmag_3
+0.1
+0.2
+0.6
+0.8
+0.6
magnetic pulldown
150_an_nonmag_1
+0.2
+0.3
+0.5
+0.8
+0.8
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AMB_RS19270
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AMB_RS19275
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