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Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS19130 and AMB_RS19135 are separated by 80 nucleotides
AMB_RS19135 and AMB_RS19140 overlap by 1 nucleotides
AMB_RS19140 and AMB_RS23615 are separated by 7 nucleotides
AMB_RS23615 and AMB_RS19150 are separated by 191 nucleotides
AMB_RS19130: AMB_RS19130 - tRNA-Gln, at 4,160,540 to 4,160,613
_RS19130
AMB_RS19135: AMB_RS19135 - Ppx/GppA family phosphatase, at 4,160,694 to 4,161,842
_RS19135
AMB_RS19140: AMB_RS19140 - 23S rRNA methyltransferase, at 4,161,842 to 4,162,576
_RS19140
AMB_RS23615: AMB_RS23615 - host attachment protein, at 4,162,584 to 4,163,033
_RS23615
AMB_RS19150: AMB_RS19150 - IMP dehydrogenase, at 4,163,225 to 4,164,685
_RS19150
Group
Condition
AMB
_RS19130
AMB
_RS19135
AMB
_RS19140
AMB
_RS23615
AMB
_RS19150
magnetic pulldown
30_an_nonmag_3
N.D.
N.D.
N.D.
-0.9
N.D.
magnetic pulldown
30_an_nonmag_1
N.D.
N.D.
N.D.
-0.9
N.D.
magnetic pulldown
30_an_initial_3
N.D.
N.D.
N.D.
-0.8
N.D.
magnetic pulldown
30_an_mag_2
N.D.
N.D.
N.D.
-0.7
N.D.
magnetic pulldown
30_an_mag_1
N.D.
N.D.
N.D.
-0.7
N.D.
magnetic pulldown
30_an_initial_2
N.D.
N.D.
N.D.
-0.5
N.D.
magnetic pulldown
30_an_initial_1
N.D.
N.D.
N.D.
-0.5
N.D.
magnetic pulldown
30_an_nonmag_2
N.D.
N.D.
N.D.
-0.5
N.D.
magnetic pulldown
150_an_nonmag_1
N.D.
N.D.
N.D.
-0.5
N.D.
magnetic pulldown
150_an_nonmag_3
N.D.
N.D.
N.D.
-0.4
N.D.
magnetic pulldown
150_an_nonmag_2
N.D.
N.D.
N.D.
-0.4
N.D.
magnetic pulldown
30_an_mag_3
N.D.
N.D.
N.D.
-0.3
N.D.
magnetic pulldown
30_nonmag_3
N.D.
N.D.
N.D.
-0.1
N.D.
magnetic pulldown
an_mag_3
N.D.
N.D.
N.D.
-0.1
N.D.
magnetic pulldown
30_mag_2
N.D.
N.D.
N.D.
-0.1
N.D.
magnetic pulldown
30_mag_3
N.D.
N.D.
N.D.
-0.1
N.D.
magnetic pulldown
30_mag_1
N.D.
N.D.
N.D.
-0.1
N.D.
magnetic pulldown
without_iron3
N.D.
N.D.
N.D.
-0.1
N.D.
magnetic pulldown
30_initial_1
N.D.
N.D.
N.D.
-0.1
N.D.
carbon source
carbonsource_all
N.D.
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
150_mag_3
N.D.
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
150_mag_2
N.D.
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
150_initial_1
N.D.
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
150_nonmag_1
N.D.
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
30_nonmag_1
N.D.
N.D.
N.D.
+0.1
N.D.
carbon source
carbonsource_succinate
N.D.
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
150_nonmag_3
N.D.
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
150_initial_2
N.D.
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
30_nonmag_2
N.D.
N.D.
N.D.
+0.2
N.D.
magnetic pulldown
150_nonmag_2
N.D.
N.D.
N.D.
+0.2
N.D.
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