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Protein
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Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS18860 and AMB_RS18865 overlap by 4 nucleotides
AMB_RS18865 and AMB_RS18870 are separated by 10 nucleotides
AMB_RS18870 and AMB_RS18875 overlap by 4 nucleotides
AMB_RS18875 and AMB_RS18880 are separated by 70 nucleotides
AMB_RS18860: AMB_RS18860 - pyridoxal phosphate-dependent aminotransferase, at 4,100,282 to 4,101,514
_RS18860
AMB_RS18865: AMB_RS18865 - homoserine dehydrogenase, at 4,101,511 to 4,102,797
_RS18865
AMB_RS18870: AMB_RS18870 - fructose-bisphosphatase class II, at 4,102,808 to 4,103,800
_RS18870
AMB_RS18875: AMB_RS18875 - single-stranded-DNA-specific exonuclease RecJ, at 4,103,797 to 4,105,590
_RS18875
AMB_RS18880: AMB_RS18880 - tRNA-Glu, at 4,105,661 to 4,105,736
_RS18880
Group
Condition
AMB
_RS18860
AMB
_RS18865
AMB
_RS18870
AMB
_RS18875
AMB
_RS18880
magnetic pulldown
an_mag_3
+0.2
N.D.
-1.2
N.D.
N.D.
magnetic pulldown
30_an_mag_3
-0.2
N.D.
-0.3
N.D.
N.D.
carbon source
carbonsource_succinate
-0.2
N.D.
-0.3
N.D.
N.D.
magnetic pulldown
30_nonmag_2
-0.2
N.D.
-0.2
N.D.
N.D.
magnetic pulldown
30_an_mag_1
-0.1
N.D.
-0.2
N.D.
N.D.
magnetic pulldown
30_an_initial_2
+0.1
N.D.
-0.4
N.D.
N.D.
magnetic pulldown
30_mag_1
-0.1
N.D.
-0.1
N.D.
N.D.
magnetic pulldown
30_an_mag_2
+0.0
N.D.
-0.3
N.D.
N.D.
magnetic pulldown
30_initial_2
-0.2
N.D.
-0.1
N.D.
N.D.
magnetic pulldown
150_initial_3
-0.2
N.D.
-0.0
N.D.
N.D.
magnetic pulldown
30_initial_1
-0.1
N.D.
-0.1
N.D.
N.D.
magnetic pulldown
150_initial_1
-0.1
N.D.
-0.1
N.D.
N.D.
magnetic pulldown
30_mag_2
-0.2
N.D.
+0.0
N.D.
N.D.
magnetic pulldown
30_an_initial_3
+0.2
N.D.
-0.3
N.D.
N.D.
magnetic pulldown
30_an_initial_1
+0.0
N.D.
-0.1
N.D.
N.D.
magnetic pulldown
30_nonmag_3
-0.2
N.D.
+0.1
N.D.
N.D.
carbon source
carbonsource_all
-0.2
N.D.
+0.2
N.D.
N.D.
magnetic pulldown
150_mag_1
-0.1
N.D.
+0.1
N.D.
N.D.
magnetic pulldown
30_mag_3
-0.1
N.D.
+0.1
N.D.
N.D.
magnetic pulldown
without_iron3
-0.1
N.D.
+0.1
N.D.
N.D.
magnetic pulldown
30_nonmag_1
-0.1
N.D.
+0.2
N.D.
N.D.
magnetic pulldown
150_nonmag_3
+0.1
N.D.
+0.1
N.D.
N.D.
magnetic pulldown
150_nonmag_1
-0.1
N.D.
+0.3
N.D.
N.D.
magnetic pulldown
150_nonmag_2
-0.1
N.D.
+0.4
N.D.
N.D.
magnetic pulldown
30_an_nonmag_1
+0.5
N.D.
-0.1
N.D.
N.D.
magnetic pulldown
150_an_nonmag_3
+0.1
N.D.
+0.4
N.D.
N.D.
magnetic pulldown
30_an_nonmag_2
+0.2
N.D.
+0.5
N.D.
N.D.
magnetic pulldown
150_an_nonmag_1
+0.5
N.D.
+0.4
N.D.
N.D.
magnetic pulldown
30_an_nonmag_3
+0.5
N.D.
+0.6
N.D.
N.D.
magnetic pulldown
150_an_nonmag_2
+0.6
N.D.
+0.9
N.D.
N.D.
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