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Cofit
Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS18530 and AMB_RS23590 are separated by 112 nucleotides
AMB_RS23590 and AMB_RS18540 are separated by 146 nucleotides
AMB_RS18540 and AMB_RS18545 overlap by 4 nucleotides
AMB_RS18545 and AMB_RS18550 are separated by 36 nucleotides
AMB_RS18530: AMB_RS18530 - hypothetical protein, at 4,024,487 to 4,024,915
_RS18530
AMB_RS23590: AMB_RS23590 - hypothetical protein, at 4,025,028 to 4,025,549
_RS23590
AMB_RS18540: AMB_RS18540 - DNA-binding response regulator, at 4,025,696 to 4,026,340
_RS18540
AMB_RS18545: AMB_RS18545 - PAS domain S-box protein, at 4,026,337 to 4,028,148
_RS18545
AMB_RS18550: AMB_RS18550 - hypothetical protein, at 4,028,185 to 4,028,736
_RS18550
Group
Condition
AMB
_RS18530
AMB
_RS23590
AMB
_RS18540
AMB
_RS18545
AMB
_RS18550
magnetic pulldown
30_an_nonmag_1
-0.4
-0.1
-0.4
-0.2
-0.3
magnetic pulldown
30_an_nonmag_3
-0.3
-0.6
-0.1
-0.3
-0.0
magnetic pulldown
30_an_initial_1
-0.3
-0.4
-0.1
-0.4
-0.1
magnetic pulldown
30_an_initial_2
-0.3
-0.5
-0.0
-0.3
+0.1
magnetic pulldown
150_an_nonmag_2
+0.0
-0.3
-0.2
-0.5
+0.2
magnetic pulldown
30_an_nonmag_2
-0.1
-0.3
+0.1
-0.4
-0.0
magnetic pulldown
150_mag_2
-0.3
-0.2
-0.2
-0.1
-0.0
magnetic pulldown
30_an_initial_3
-0.4
-0.2
+0.1
-0.3
+0.1
magnetic pulldown
150_an_nonmag_3
-0.3
-0.3
+0.1
-0.3
+0.1
magnetic pulldown
150_mag_1
-0.3
-0.1
-0.0
-0.0
-0.2
magnetic pulldown
150_nonmag_2
+0.2
-0.3
-0.4
-0.1
+0.1
magnetic pulldown
30_an_mag_2
-0.1
-0.3
-0.0
-0.2
+0.1
magnetic pulldown
30_an_mag_3
-0.2
-0.3
+0.1
-0.3
+0.2
magnetic pulldown
150_an_nonmag_1
-0.0
-0.3
-0.2
-0.3
+0.4
magnetic pulldown
30_initial_3
-0.2
-0.1
-0.1
+0.2
-0.2
magnetic pulldown
150_mag_3
-0.3
-0.2
-0.2
+0.1
+0.1
magnetic pulldown
150_initial_3
-0.0
-0.2
-0.2
+0.0
-0.1
magnetic pulldown
30_an_mag_1
-0.1
-0.1
+0.1
-0.3
+0.0
magnetic pulldown
30_nonmag_3
+0.0
-0.2
-0.1
-0.0
-0.1
magnetic pulldown
150_initial_1
+0.1
-0.2
-0.1
+0.0
-0.1
magnetic pulldown
30_initial_2
+0.1
-0.1
-0.1
-0.1
-0.1
magnetic pulldown
30_nonmag_2
-0.1
-0.2
-0.1
+0.1
+0.0
magnetic pulldown
30_mag_2
+0.0
-0.2
-0.1
+0.2
-0.1
magnetic pulldown
without_iron3
+0.1
-0.1
-0.1
-0.1
+0.0
magnetic pulldown
150_nonmag_3
+0.0
-0.2
-0.1
-0.0
+0.2
carbon source
carbonsource_all
+0.2
-0.3
+0.1
+0.1
-0.3
magnetic pulldown
30_nonmag_1
+0.4
-0.1
-0.1
-0.1
-0.2
magnetic pulldown
an_mag_3
-0.7
+0.1
+0.5
+0.2
-0.1
magnetic pulldown
150_nonmag_1
+0.2
-0.3
-0.0
+0.0
+0.1
magnetic pulldown
30_initial_1
+0.2
-0.0
-0.1
+0.2
-0.0
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AMB_RS18540
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AMB_RS18550
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