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Cofit
Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS15390 and AMB_RS15395 overlap by 4 nucleotides
AMB_RS15395 and AMB_RS15400 are separated by 146 nucleotides
AMB_RS15400 and AMB_RS15405 are separated by 215 nucleotides
AMB_RS15405 and AMB_RS15410 are separated by 87 nucleotides
AMB_RS15390: AMB_RS15390 - hypothetical protein, at 3,299,875 to 3,301,386
_RS15390
AMB_RS15395: AMB_RS15395 - hypothetical protein, at 3,301,383 to 3,302,000
_RS15395
AMB_RS15400: AMB_RS15400 - GntR family transcriptional regulator, at 3,302,147 to 3,302,857
_RS15400
AMB_RS15405: AMB_RS15405 - tetratricopeptide repeat protein, at 3,303,073 to 3,304,818
_RS15405
AMB_RS15410: AMB_RS15410 - outer membrane protein, at 3,304,906 to 3,306,501
_RS15410
Group
Condition
AMB
_RS15390
AMB
_RS15395
AMB
_RS15400
AMB
_RS15405
AMB
_RS15410
magnetic pulldown
30_an_nonmag_1
-0.1
-0.5
-0.8
-0.3
-0.6
magnetic pulldown
30_an_initial_1
-0.0
+0.1
-0.9
-0.2
-0.7
magnetic pulldown
30_an_mag_3
-0.1
-0.0
-0.9
-0.1
-0.3
magnetic pulldown
30_an_initial_3
-0.2
-0.1
-0.6
-0.1
-0.5
magnetic pulldown
150_nonmag_1
-0.0
-0.1
-0.2
+0.0
-1.1
magnetic pulldown
30_an_nonmag_3
+0.1
-0.2
-0.1
-0.3
-0.7
magnetic pulldown
an_mag_3
+0.2
-0.1
-1.2
-0.2
+0.2
magnetic pulldown
30_an_mag_1
-0.3
+0.1
-0.7
-0.2
-0.0
magnetic pulldown
150_nonmag_2
-0.0
+0.1
-1.1
+0.3
-0.4
magnetic pulldown
30_an_initial_2
-0.2
+0.0
-0.6
-0.2
-0.1
magnetic pulldown
30_an_mag_2
-0.0
+0.1
-0.8
+0.0
-0.1
magnetic pulldown
30_an_nonmag_2
-0.1
+0.1
+0.1
-0.1
-0.5
magnetic pulldown
30_initial_2
+0.1
+0.1
+0.3
-0.0
-0.8
magnetic pulldown
without_iron1
+0.1
-0.1
+0.2
-0.1
-0.3
magnetic pulldown
150_an_nonmag_1
+0.2
+0.2
-0.8
-0.1
+0.4
magnetic pulldown
without_iron2
+0.0
+0.0
+0.4
-0.1
-0.4
magnetic pulldown
30_nonmag_1
-0.1
-0.2
+0.4
-0.1
+0.2
magnetic pulldown
30_initial_1
+0.1
-0.1
+0.3
-0.0
-0.2
carbon source
carbonsource_succinate
-0.1
+0.1
+0.4
-0.0
-0.2
magnetic pulldown
30_initial_3
+0.1
-0.1
+0.4
-0.0
-0.3
magnetic pulldown
without_iron3
+0.0
+0.1
+0.4
+0.0
-0.3
magnetic pulldown
150_an_nonmag_2
+0.1
+0.6
+0.1
-0.1
-0.1
carbon source
carbonsource_all
+0.1
+0.2
+0.3
+0.1
-0.2
magnetic pulldown
150_mag_3
+0.0
+0.1
+0.4
-0.1
+0.3
magnetic pulldown
30_mag_3
+0.0
+0.1
+0.3
-0.1
+0.3
magnetic pulldown
150_initial_2
-0.1
+0.1
+0.4
+0.0
+0.3
magnetic pulldown
150_mag_2
+0.0
+0.0
+0.4
-0.0
+0.3
magnetic pulldown
30_nonmag_3
+0.0
+0.1
+0.7
+0.0
+0.1
magnetic pulldown
150_initial_3
+0.1
+0.2
+0.4
+0.1
+0.3
magnetic pulldown
30_nonmag_2
-0.0
+0.4
+0.7
-0.0
+0.1
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