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Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS15260 and AMB_RS15265 are separated by 23 nucleotides
AMB_RS15265 and AMB_RS15270 overlap by 4 nucleotides
AMB_RS15270 and AMB_RS15275 are separated by 209 nucleotides
AMB_RS15275 and AMB_RS15280 are separated by 175 nucleotides
AMB_RS15260: AMB_RS15260 - cysteine desulfurase, at 3,271,350 to 3,272,483
_RS15260
AMB_RS15265: AMB_RS15265 - Rrf2 family transcriptional regulator, at 3,272,507 to 3,272,980
_RS15265
AMB_RS15270: AMB_RS15270 - serine O-acetyltransferase, at 3,272,977 to 3,273,768
_RS15270
AMB_RS15275: AMB_RS15275 - alpha/beta hydrolase, at 3,273,978 to 3,274,673
_RS15275
AMB_RS15280: AMB_RS15280 - hypothetical protein, at 3,274,849 to 3,275,208
_RS15280
Group
Condition
AMB
_RS15260
AMB
_RS15265
AMB
_RS15270
AMB
_RS15275
AMB
_RS15280
magnetic pulldown
150_nonmag_2
N.D.
N.D.
N.D.
N.D.
-1.1
magnetic pulldown
150_nonmag_3
N.D.
N.D.
N.D.
N.D.
-0.7
magnetic pulldown
150_an_nonmag_1
N.D.
N.D.
N.D.
N.D.
-0.2
magnetic pulldown
30_nonmag_3
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
carbonsource_succinate
N.D.
N.D.
N.D.
N.D.
+0.2
magnetic pulldown
without_iron3
N.D.
N.D.
N.D.
N.D.
+0.2
magnetic pulldown
30_mag_3
N.D.
N.D.
N.D.
N.D.
+0.2
magnetic pulldown
150_mag_3
N.D.
N.D.
N.D.
N.D.
+0.2
magnetic pulldown
150_initial_3
N.D.
N.D.
N.D.
N.D.
+0.2
magnetic pulldown
30_mag_2
N.D.
N.D.
N.D.
N.D.
+0.3
magnetic pulldown
30_an_initial_1
N.D.
N.D.
N.D.
N.D.
+0.3
magnetic pulldown
150_an_nonmag_3
N.D.
N.D.
N.D.
N.D.
+0.3
magnetic pulldown
30_an_initial_3
N.D.
N.D.
N.D.
N.D.
+0.3
magnetic pulldown
30_an_nonmag_1
N.D.
N.D.
N.D.
N.D.
+0.3
magnetic pulldown
30_an_mag_1
N.D.
N.D.
N.D.
N.D.
+0.3
magnetic pulldown
150_nonmag_1
N.D.
N.D.
N.D.
N.D.
+0.3
magnetic pulldown
without_iron2
N.D.
N.D.
N.D.
N.D.
+0.4
magnetic pulldown
30_initial_3
N.D.
N.D.
N.D.
N.D.
+0.4
magnetic pulldown
30_nonmag_1
N.D.
N.D.
N.D.
N.D.
+0.4
magnetic pulldown
30_an_mag_3
N.D.
N.D.
N.D.
N.D.
+0.4
magnetic pulldown
an_mag_3
N.D.
N.D.
N.D.
N.D.
+0.4
magnetic pulldown
30_mag_1
N.D.
N.D.
N.D.
N.D.
+0.4
magnetic pulldown
30_initial_1
N.D.
N.D.
N.D.
N.D.
+0.5
magnetic pulldown
30_an_mag_2
N.D.
N.D.
N.D.
N.D.
+0.5
magnetic pulldown
30_initial_2
N.D.
N.D.
N.D.
N.D.
+0.5
magnetic pulldown
30_nonmag_2
N.D.
N.D.
N.D.
N.D.
+0.5
magnetic pulldown
30_an_nonmag_3
N.D.
N.D.
N.D.
N.D.
+0.5
magnetic pulldown
150_an_nonmag_2
N.D.
N.D.
N.D.
N.D.
+0.5
magnetic pulldown
30_an_initial_2
N.D.
N.D.
N.D.
N.D.
+0.6
magnetic pulldown
30_an_nonmag_2
N.D.
N.D.
N.D.
N.D.
+0.7
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