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Cofit
Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS14770 and AMB_RS14775 are separated by 427 nucleotides
AMB_RS14775 and AMB_RS14780 are separated by 27 nucleotides
AMB_RS14780 and AMB_RS14785 overlap by 4 nucleotides
AMB_RS14785 and AMB_RS14790 overlap by 13 nucleotides
AMB_RS14770: AMB_RS14770 - C4-dicarboxylate transport sensor protein dctB, at 3,133,324 to 3,135,300
_RS14770
AMB_RS14775: AMB_RS14775 - hypothetical protein, at 3,135,728 to 3,136,927
_RS14775
AMB_RS14780: AMB_RS14780 - ATPase, at 3,136,955 to 3,142,894
_RS14780
AMB_RS14785: AMB_RS14785 - chemotaxis protein CheX, at 3,142,891 to 3,143,436
_RS14785
AMB_RS14790: AMB_RS14790 - response regulator, at 3,143,424 to 3,143,789
_RS14790
Group
Condition
AMB
_RS14770
AMB
_RS14775
AMB
_RS14780
AMB
_RS14785
AMB
_RS14790
magnetic pulldown
150_nonmag_1
-0.1
+0.0
+0.0
-0.5
-0.2
magnetic pulldown
150_mag_1
-0.2
+0.2
-0.0
-0.4
-0.1
magnetic pulldown
150_initial_1
-0.2
+0.0
-0.0
-0.3
+0.1
magnetic pulldown
30_an_initial_1
+0.1
-0.0
+0.1
-0.1
-0.4
magnetic pulldown
150_initial_3
+0.1
-0.1
+0.0
-0.2
-0.1
magnetic pulldown
150_initial_2
-0.1
-0.2
-0.0
-0.2
+0.1
magnetic pulldown
150_mag_2
-0.2
+0.0
+0.0
-0.1
-0.0
magnetic pulldown
30_initial_2
+0.0
-0.0
+0.0
-0.2
-0.0
magnetic pulldown
30_nonmag_3
+0.0
+0.0
-0.0
-0.3
+0.0
magnetic pulldown
without_iron3
+0.0
-0.0
+0.0
-0.3
+0.1
magnetic pulldown
150_mag_3
-0.0
+0.1
+0.0
-0.2
-0.0
magnetic pulldown
30_initial_1
+0.1
+0.1
+0.0
-0.3
-0.0
magnetic pulldown
150_nonmag_3
+0.2
-0.1
+0.1
-0.3
-0.0
magnetic pulldown
30_nonmag_2
+0.1
-0.1
+0.0
-0.2
+0.0
magnetic pulldown
150_nonmag_2
+0.1
-0.1
+0.2
-0.2
+0.0
carbon source
carbonsource_succinate
-0.0
+0.1
+0.0
-0.2
+0.0
magnetic pulldown
30_mag_2
-0.1
+0.1
+0.0
-0.1
-0.0
magnetic pulldown
30_nonmag_1
+0.0
+0.0
+0.0
-0.1
+0.1
carbon source
carbonsource_all
+0.1
+0.0
+0.2
-0.2
-0.1
magnetic pulldown
without_iron1
+0.2
+0.0
+0.0
-0.2
+0.1
magnetic pulldown
30_an_mag_3
+0.1
-0.1
+0.0
+0.1
+0.0
magnetic pulldown
an_mag_3
-0.2
-0.0
-0.0
+0.3
+0.2
magnetic pulldown
30_an_nonmag_3
+0.1
+0.0
+0.1
+0.3
-0.2
magnetic pulldown
30_an_initial_3
+0.1
+0.0
+0.1
+0.1
-0.0
magnetic pulldown
150_an_nonmag_1
+0.3
+0.0
+0.1
+0.4
-0.4
magnetic pulldown
150_an_nonmag_2
-0.1
-0.0
+0.2
+0.5
+0.1
magnetic pulldown
150_an_nonmag_3
+0.1
+0.1
+0.1
+0.4
+0.2
magnetic pulldown
30_an_initial_2
+0.1
+0.1
+0.1
+0.4
+0.2
magnetic pulldown
30_an_nonmag_2
+0.3
-0.1
+0.2
+0.4
+0.1
magnetic pulldown
30_an_nonmag_1
+0.2
+0.2
+0.2
+0.5
+0.5
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AMB_RS14780
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