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Cofit
Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS14655 and AMB_RS14660 are separated by 16 nucleotides
AMB_RS14660 and AMB_RS14665 overlap by 41 nucleotides
AMB_RS14665 and AMB_RS14670 overlap by 4 nucleotides
AMB_RS14670 and AMB_RS14675 overlap by 4 nucleotides
AMB_RS14655: AMB_RS14655 - hypothetical protein, at 3,109,168 to 3,109,845
_RS14655
AMB_RS14660: AMB_RS14660 - hypothetical protein, at 3,109,862 to 3,110,182
_RS14660
AMB_RS14665: AMB_RS14665 - TRASH domain-containing protein, at 3,110,142 to 3,110,321
_RS14665
AMB_RS14670: AMB_RS14670 - TlpA family protein disulfide reductase, at 3,110,318 to 3,110,806
_RS14670
AMB_RS14675: AMB_RS14675 - hypothetical protein, at 3,110,803 to 3,111,840
_RS14675
Group
Condition
AMB
_RS14655
AMB
_RS14660
AMB
_RS14665
AMB
_RS14670
AMB
_RS14675
magnetic pulldown
an_mag_3
-0.2
+0.4
-0.8
-0.1
-0.1
magnetic pulldown
30_nonmag_1
-0.2
-0.2
-0.3
-0.1
+0.1
magnetic pulldown
30_an_nonmag_2
-0.2
-0.2
-0.2
+0.0
+0.0
carbon source
carbonsource_all
-1.0
-0.1
+0.1
+0.2
+0.1
magnetic pulldown
150_an_nonmag_2
-0.2
-0.6
+0.1
-0.2
+0.3
magnetic pulldown
30_nonmag_3
+0.4
-0.4
-0.1
-0.2
-0.0
magnetic pulldown
30_initial_2
+0.1
-0.4
-0.2
+0.2
-0.1
magnetic pulldown
150_nonmag_1
+0.0
+0.1
-0.3
-0.1
+0.1
carbon source
carbonsource_succinate
+0.4
-0.1
-0.5
+0.1
-0.1
magnetic pulldown
150_mag_1
+0.1
+0.0
-0.4
-0.0
+0.1
magnetic pulldown
30_mag_3
-0.1
+0.1
-0.3
+0.1
-0.0
magnetic pulldown
150_mag_3
-0.2
-0.0
-0.1
+0.3
+0.1
magnetic pulldown
150_nonmag_3
+0.3
-0.2
-0.1
+0.0
+0.1
magnetic pulldown
150_mag_2
+0.0
+0.1
-0.1
+0.2
-0.2
magnetic pulldown
150_an_nonmag_1
+0.2
+0.0
-1.0
+0.6
+0.2
magnetic pulldown
30_initial_1
+0.3
+0.1
-0.2
+0.0
-0.0
magnetic pulldown
30_mag_2
+0.1
+0.1
-0.1
+0.2
-0.1
magnetic pulldown
150_initial_2
+0.5
-0.2
-0.2
+0.0
-0.0
magnetic pulldown
30_an_nonmag_3
+0.1
-0.1
-0.6
+0.3
+0.4
magnetic pulldown
150_nonmag_2
+0.8
-0.4
-0.5
+0.5
-0.2
magnetic pulldown
without_iron3
-0.1
+0.1
-0.2
+0.5
-0.0
magnetic pulldown
30_nonmag_2
+0.5
-0.4
+0.1
-0.1
+0.1
magnetic pulldown
150_initial_1
-0.0
-0.2
-0.1
+0.6
-0.0
magnetic pulldown
30_an_initial_3
+0.0
+0.0
-0.2
+0.4
+0.1
magnetic pulldown
30_an_initial_1
+0.2
+0.0
+0.1
-0.1
+0.2
magnetic pulldown
30_mag_1
+0.4
+0.3
-0.4
+0.3
-0.2
magnetic pulldown
30_an_mag_1
+0.1
+0.2
+0.1
+0.1
+0.2
magnetic pulldown
150_an_nonmag_3
+0.2
-0.1
+0.2
+0.1
+0.3
magnetic pulldown
30_an_mag_2
+0.2
+0.2
+0.1
+0.2
+0.1
magnetic pulldown
30_an_nonmag_1
+0.5
-0.2
+0.3
+0.3
+0.6
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AMB_RS14665
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