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Cofit
Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS14215 and AMB_RS14220 are separated by 60 nucleotides
AMB_RS14220 and AMB_RS14225 are separated by 66 nucleotides
AMB_RS14225 and AMB_RS14230 are separated by 154 nucleotides
AMB_RS14230 and AMB_RS14235 are separated by 129 nucleotides
AMB_RS14215: AMB_RS14215 - FAA hydrolase family protein, at 3,020,614 to 3,021,636
_RS14215
AMB_RS14220: AMB_RS14220 - oligoendopeptidase F, at 3,021,697 to 3,023,484
_RS14220
AMB_RS14225: AMB_RS14225 - AMP-dependent synthetase, at 3,023,551 to 3,025,347
_RS14225
AMB_RS14230: AMB_RS14230 - response regulator, at 3,025,502 to 3,026,413
_RS14230
AMB_RS14235: AMB_RS14235 - GGDEF domain-containing response regulator, at 3,026,543 to 3,027,496
_RS14235
Group
Condition
AMB
_RS14215
AMB
_RS14220
AMB
_RS14225
AMB
_RS14230
AMB
_RS14235
magnetic pulldown
150_an_nonmag_3
-0.3
+0.0
+0.1
-1.3
-0.0
magnetic pulldown
30_an_nonmag_1
-0.1
-0.1
+0.1
-1.2
-0.2
magnetic pulldown
150_an_nonmag_2
-0.3
-0.1
+0.4
-1.5
+0.3
magnetic pulldown
an_mag_3
-0.1
+0.0
+0.1
-1.5
+0.5
magnetic pulldown
30_an_initial_3
-0.4
+0.1
+0.1
-0.7
+0.0
magnetic pulldown
30_an_mag_3
-0.3
-0.0
+0.1
-0.6
+0.1
magnetic pulldown
30_an_nonmag_2
-0.1
-0.0
+0.4
-1.0
+0.0
magnetic pulldown
150_an_nonmag_1
-0.5
+0.0
+0.3
-0.3
-0.1
magnetic pulldown
30_an_mag_2
-0.2
+0.0
+0.1
-0.8
+0.2
magnetic pulldown
30_an_mag_1
-0.1
+0.0
+0.2
-0.7
+0.2
carbon source
carbonsource_all
+0.0
-0.0
+0.1
-0.2
-0.2
magnetic pulldown
30_an_initial_1
-0.1
+0.1
+0.1
-0.5
+0.1
magnetic pulldown
30_mag_1
-0.1
-0.0
-0.1
-0.1
+0.1
magnetic pulldown
without_iron2
-0.1
-0.2
-0.1
+0.0
-0.0
magnetic pulldown
30_an_initial_2
-0.1
-0.0
+0.4
-0.5
+0.1
magnetic pulldown
30_mag_3
-0.1
-0.0
+0.1
-0.1
-0.0
magnetic pulldown
150_initial_3
+0.1
-0.0
+0.2
-0.2
-0.1
magnetic pulldown
without_iron1
-0.1
-0.1
-0.1
+0.3
+0.0
carbon source
carbonsource_succinate
-0.0
-0.0
-0.1
+0.3
-0.2
magnetic pulldown
30_initial_2
-0.0
+0.1
-0.1
+0.4
-0.2
magnetic pulldown
150_initial_2
+0.1
-0.0
-0.1
+0.3
-0.2
magnetic pulldown
30_mag_2
+0.2
+0.0
+0.1
-0.1
-0.1
magnetic pulldown
30_initial_1
-0.0
+0.0
-0.0
+0.4
-0.2
magnetic pulldown
30_nonmag_3
-0.1
-0.1
+0.2
+0.3
-0.0
magnetic pulldown
150_nonmag_2
+0.1
-0.2
+0.0
+0.4
-0.0
magnetic pulldown
150_nonmag_3
-0.2
-0.1
+0.2
+0.5
+0.0
magnetic pulldown
150_nonmag_1
+0.1
+0.0
+0.0
+0.6
-0.2
magnetic pulldown
30_nonmag_2
-0.2
+0.2
+0.0
+0.7
-0.2
magnetic pulldown
30_nonmag_1
-0.0
+0.0
+0.0
+0.6
+0.0
magnetic pulldown
30_an_nonmag_3
-0.0
-0.0
+0.3
+0.4
+0.1
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AMB_RS14225
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