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Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS14070 and AMB_RS14075 overlap by 8 nucleotides
AMB_RS14075 and AMB_RS14080 are separated by 82 nucleotides
AMB_RS14080 and AMB_RS14085 overlap by 41 nucleotides
AMB_RS14085 and AMB_RS14090 are separated by 82 nucleotides
AMB_RS14070: AMB_RS14070 - malonyl-CoA decarboxylase, at 2,986,537 to 2,987,952
_RS14070
AMB_RS14075: AMB_RS14075 - bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase, at 2,987,945 to 2,989,399
_RS14075
AMB_RS14080: AMB_RS14080 - D-amino-acid dehydrogenase, at 2,989,482 to 2,990,750
_RS14080
AMB_RS14085: AMB_RS14085 - hemerythrin-like protein, at 2,990,710 to 2,991,225
_RS14085
AMB_RS14090: AMB_RS14090 - two-component sensor histidine kinase, at 2,991,308 to 2,993,026
_RS14090
Group
Condition
AMB
_RS14070
AMB
_RS14075
AMB
_RS14080
AMB
_RS14085
AMB
_RS14090
magnetic pulldown
an_mag_3
-0.6
-1.9
N.D.
+0.4
-0.7
magnetic pulldown
30_an_mag_2
-0.2
-0.2
N.D.
-0.4
-0.3
magnetic pulldown
30_an_nonmag_3
-0.0
+0.1
N.D.
-0.5
-0.4
magnetic pulldown
30_an_initial_2
-0.1
+0.1
N.D.
-0.6
-0.0
magnetic pulldown
150_an_nonmag_3
+0.0
+0.0
N.D.
-0.5
-0.3
magnetic pulldown
30_an_mag_3
-0.2
+0.1
N.D.
-0.4
-0.2
magnetic pulldown
150_an_nonmag_1
-0.0
+0.2
N.D.
-0.5
-0.4
magnetic pulldown
30_an_initial_1
-0.1
+0.1
N.D.
-0.2
-0.4
magnetic pulldown
30_an_initial_3
-0.2
+0.1
N.D.
-0.2
-0.3
magnetic pulldown
30_nonmag_2
+0.1
-0.4
N.D.
-0.2
-0.0
magnetic pulldown
30_an_mag_1
-0.1
+0.2
N.D.
-0.4
-0.2
carbon source
carbonsource_all
-0.2
-0.2
N.D.
+0.3
-0.3
magnetic pulldown
150_nonmag_2
-0.2
-0.3
N.D.
+0.7
-0.6
magnetic pulldown
150_initial_1
+0.1
-0.4
N.D.
+0.0
-0.1
magnetic pulldown
30_an_nonmag_2
-0.4
+0.4
N.D.
-0.2
-0.2
magnetic pulldown
30_nonmag_3
+0.2
-0.6
N.D.
+0.3
-0.1
magnetic pulldown
30_mag_1
+0.1
-0.2
N.D.
-0.1
+0.0
magnetic pulldown
30_initial_2
+0.2
-0.3
N.D.
-0.1
+0.0
magnetic pulldown
without_iron2
+0.2
-0.1
N.D.
-0.1
-0.1
magnetic pulldown
150_initial_3
-0.0
-0.3
N.D.
+0.2
-0.0
magnetic pulldown
150_nonmag_1
+0.2
-0.1
N.D.
-0.2
+0.0
magnetic pulldown
without_iron3
+0.1
-0.2
N.D.
-0.0
+0.1
magnetic pulldown
without_iron1
+0.0
-0.3
N.D.
+0.2
+0.1
magnetic pulldown
30_initial_3
+0.1
+0.2
N.D.
-0.1
-0.0
magnetic pulldown
150_initial_2
+0.1
-0.1
N.D.
+0.3
+0.0
magnetic pulldown
30_an_nonmag_1
+0.5
+0.1
N.D.
+0.3
-0.5
magnetic pulldown
150_nonmag_3
+0.1
+0.0
N.D.
+0.1
+0.4
magnetic pulldown
30_mag_3
+0.4
+0.3
N.D.
-0.3
+0.1
magnetic pulldown
150_mag_3
+0.1
+0.0
N.D.
+0.3
+0.1
magnetic pulldown
150_an_nonmag_2
-0.2
+0.7
N.D.
+0.3
+0.2
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