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Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS13445 and AMB_RS13450 are separated by 2 nucleotides
AMB_RS13450 and AMB_RS13455 are separated by 13 nucleotides
AMB_RS13455 and AMB_RS13460 are separated by 115 nucleotides
AMB_RS13460 and AMB_RS13465 overlap by 4 nucleotides
AMB_RS13445: AMB_RS13445 - 4Fe-4S dicluster domain-containing protein, at 2,864,716 to 2,865,351
_RS13445
AMB_RS13450: AMB_RS13450 - hypothetical protein, at 2,865,354 to 2,865,617
_RS13450
AMB_RS13455: AMB_RS13455 - formate dehydrogenase subunit gamma, at 2,865,631 to 2,866,611
_RS13455
AMB_RS13460: AMB_RS13460 - transferase hexapeptide repeat family protein, at 2,866,727 to 2,867,344
_RS13460
AMB_RS13465: AMB_RS13465 - acyl-CoA thioesterase, at 2,867,341 to 2,867,784
_RS13465
Group
Condition
AMB
_RS13445
AMB
_RS13450
AMB
_RS13455
AMB
_RS13460
AMB
_RS13465
magnetic pulldown
30_an_nonmag_1
-0.6
-1.1
+0.2
-0.7
+0.2
magnetic pulldown
an_mag_3
-1.4
-0.8
+0.1
+0.6
-0.1
magnetic pulldown
without_iron1
-0.3
-0.2
-0.1
-0.1
-0.1
magnetic pulldown
150_initial_1
-0.3
-0.1
-0.1
-0.0
-0.2
magnetic pulldown
150_nonmag_2
-0.1
-0.7
+0.0
-0.2
+0.2
magnetic pulldown
30_mag_3
-0.4
-0.4
+0.0
+0.2
-0.1
carbon source
carbonsource_succinate
-0.2
-0.3
-0.1
-0.0
+0.0
magnetic pulldown
150_initial_2
-0.2
-0.3
+0.0
+0.0
-0.1
magnetic pulldown
150_nonmag_1
-0.2
-0.0
-0.0
-0.2
-0.1
magnetic pulldown
30_nonmag_3
-0.1
-0.0
-0.1
+0.1
-0.3
magnetic pulldown
150_an_nonmag_3
-0.1
-0.5
-0.0
-0.0
+0.3
magnetic pulldown
30_mag_1
-0.3
-0.2
-0.1
+0.2
-0.1
magnetic pulldown
without_iron3
-0.1
-0.1
-0.2
+0.0
-0.1
magnetic pulldown
30_initial_1
-0.2
-0.2
-0.1
+0.1
+0.0
magnetic pulldown
30_nonmag_1
-0.2
+0.1
-0.1
+0.1
-0.2
magnetic pulldown
30_mag_2
-0.1
-0.2
+0.1
+0.2
-0.3
magnetic pulldown
150_mag_1
-0.1
-0.1
-0.1
+0.1
-0.2
magnetic pulldown
30_nonmag_2
-0.2
-0.1
-0.1
+0.5
-0.4
magnetic pulldown
150_initial_3
-0.1
+0.1
-0.2
+0.3
-0.1
magnetic pulldown
30_an_nonmag_2
-0.6
+0.3
+0.0
+0.2
+0.2
magnetic pulldown
150_nonmag_3
-0.1
+0.3
-0.2
-0.0
+0.1
magnetic pulldown
30_initial_2
+0.1
+0.0
-0.1
+0.3
-0.1
magnetic pulldown
30_an_initial_1
-0.1
+0.1
+0.2
-0.1
+0.1
magnetic pulldown
150_an_nonmag_1
+0.2
-0.1
-0.1
-0.0
+0.2
magnetic pulldown
30_an_mag_3
-0.1
-0.1
+0.0
+0.3
+0.1
magnetic pulldown
30_an_initial_3
-0.2
+0.0
+0.0
+0.2
+0.1
magnetic pulldown
30_an_initial_2
-0.2
-0.2
+0.1
+0.5
+0.1
magnetic pulldown
30_an_mag_1
-0.1
+0.2
+0.1
+0.1
+0.1
magnetic pulldown
30_an_mag_2
-0.1
+0.1
+0.2
+0.1
+0.2
carbon source
carbonsource_all
+0.5
+0.8
+0.0
+0.0
+0.3
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