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Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS12660 and AMB_RS12665 are separated by 90 nucleotides
AMB_RS12665 and AMB_RS12670 overlap by 4 nucleotides
AMB_RS12670 and AMB_RS12675 overlap by 1 nucleotides
AMB_RS12675 and AMB_RS12680 are separated by 1 nucleotides
AMB_RS12660: AMB_RS12660 - methyl-accepting chemotaxis protein, at 2,698,130 to 2,700,274
_RS12660
AMB_RS12665: AMB_RS12665 - M23 family peptidase, at 2,700,365 to 2,701,456
_RS12665
AMB_RS12670: AMB_RS12670 - protein-L-isoaspartate O-methyltransferase, at 2,701,453 to 2,702,097
_RS12670
AMB_RS12675: AMB_RS12675 - 5'-nucleotidase SurE, at 2,702,097 to 2,702,879
_RS12675
AMB_RS12680: AMB_RS12680 - serine--tRNA ligase, at 2,702,881 to 2,704,149
_RS12680
Group
Condition
AMB
_RS12660
AMB
_RS12665
AMB
_RS12670
AMB
_RS12675
AMB
_RS12680
magnetic pulldown
30_an_nonmag_2
-0.1
-0.6
-0.4
N.D.
N.D.
magnetic pulldown
150_nonmag_3
+0.2
-0.7
-0.6
N.D.
N.D.
magnetic pulldown
150_mag_2
-0.1
-0.4
-0.5
N.D.
N.D.
magnetic pulldown
without_iron1
-0.1
-0.2
-0.5
N.D.
N.D.
magnetic pulldown
30_an_initial_2
-0.1
-0.6
-0.1
N.D.
N.D.
magnetic pulldown
30_mag_2
-0.0
-0.3
-0.4
N.D.
N.D.
magnetic pulldown
30_an_initial_1
-0.0
-0.3
-0.4
N.D.
N.D.
magnetic pulldown
150_mag_3
-0.1
-0.3
-0.4
N.D.
N.D.
magnetic pulldown
150_mag_1
+0.1
-0.3
-0.5
N.D.
N.D.
magnetic pulldown
30_nonmag_2
-0.1
-0.2
-0.4
N.D.
N.D.
magnetic pulldown
150_initial_1
-0.0
-0.2
-0.5
N.D.
N.D.
carbon source
carbonsource_all
+0.1
-0.2
-0.6
N.D.
N.D.
magnetic pulldown
150_initial_3
-0.1
-0.1
-0.5
N.D.
N.D.
magnetic pulldown
30_an_nonmag_3
-0.3
-0.2
-0.2
N.D.
N.D.
carbon source
carbonsource_succinate
-0.1
-0.4
-0.1
N.D.
N.D.
magnetic pulldown
without_iron3
+0.1
-0.3
-0.3
N.D.
N.D.
magnetic pulldown
30_mag_1
-0.1
-0.5
+0.1
N.D.
N.D.
magnetic pulldown
30_an_initial_3
+0.0
-0.2
-0.4
N.D.
N.D.
magnetic pulldown
30_an_mag_2
+0.0
-0.1
-0.5
N.D.
N.D.
magnetic pulldown
30_nonmag_3
-0.2
-0.5
+0.2
N.D.
N.D.
magnetic pulldown
30_initial_3
-0.0
-0.4
-0.1
N.D.
N.D.
magnetic pulldown
150_nonmag_2
-0.1
+0.1
-0.4
N.D.
N.D.
magnetic pulldown
30_an_mag_1
+0.1
-0.4
-0.2
N.D.
N.D.
magnetic pulldown
30_an_nonmag_1
+0.1
-0.6
+0.2
N.D.
N.D.
magnetic pulldown
150_nonmag_1
+0.1
-0.3
-0.1
N.D.
N.D.
magnetic pulldown
150_initial_2
+0.1
-0.7
+0.4
N.D.
N.D.
magnetic pulldown
150_an_nonmag_3
+0.1
-0.4
+0.1
N.D.
N.D.
magnetic pulldown
150_an_nonmag_1
-0.4
+0.3
+0.1
N.D.
N.D.
magnetic pulldown
an_mag_3
+0.3
+0.1
+0.6
N.D.
N.D.
magnetic pulldown
150_an_nonmag_2
+0.4
+0.3
+0.8
N.D.
N.D.
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