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Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS12445 and AMB_RS12450 are separated by 75 nucleotides
AMB_RS12450 and AMB_RS12455 are separated by 86 nucleotides
AMB_RS12455 and AMB_RS12460 are separated by 41 nucleotides
AMB_RS12460 and AMB_RS12465 are separated by 164 nucleotides
AMB_RS12445: AMB_RS12445 - rRNA pseudouridine synthase, at 2,656,179 to 2,656,880
_RS12445
AMB_RS12450: AMB_RS12450 - class I SAM-dependent methyltransferase, at 2,656,956 to 2,657,981
_RS12450
AMB_RS12455: AMB_RS12455 - hypothetical protein, at 2,658,068 to 2,658,391
_RS12455
AMB_RS12460: AMB_RS12460 - ferredoxin, at 2,658,433 to 2,658,786
_RS12460
AMB_RS12465: AMB_RS12465 - DUF4170 domain-containing protein, at 2,658,951 to 2,659,358
_RS12465
Group
Condition
AMB
_RS12445
AMB
_RS12450
AMB
_RS12455
AMB
_RS12460
AMB
_RS12465
magnetic pulldown
150_an_nonmag_3
-0.6
-0.5
-0.5
N.D.
N.D.
magnetic pulldown
an_mag_3
+0.4
+0.1
-1.8
N.D.
N.D.
magnetic pulldown
30_an_initial_2
-0.3
-0.2
-0.2
N.D.
N.D.
magnetic pulldown
30_an_nonmag_1
-0.1
+0.1
-0.5
N.D.
N.D.
magnetic pulldown
150_an_nonmag_1
-0.4
-0.0
-0.1
N.D.
N.D.
magnetic pulldown
30_an_nonmag_2
-0.5
-0.3
+0.5
N.D.
N.D.
magnetic pulldown
30_an_initial_1
-0.3
+0.1
-0.1
N.D.
N.D.
magnetic pulldown
30_an_mag_1
-0.4
+0.0
+0.2
N.D.
N.D.
magnetic pulldown
30_nonmag_3
-0.3
-0.1
+0.3
N.D.
N.D.
magnetic pulldown
30_nonmag_2
-0.1
-0.1
+0.2
N.D.
N.D.
magnetic pulldown
without_iron2
-0.2
+0.2
+0.0
N.D.
N.D.
magnetic pulldown
without_iron1
-0.2
-0.1
+0.4
N.D.
N.D.
magnetic pulldown
30_initial_2
-0.2
+0.0
+0.4
N.D.
N.D.
magnetic pulldown
30_an_nonmag_3
-0.4
+0.2
+0.4
N.D.
N.D.
magnetic pulldown
30_nonmag_1
-0.2
+0.1
+0.3
N.D.
N.D.
magnetic pulldown
150_an_nonmag_2
-0.3
+0.4
+0.1
N.D.
N.D.
magnetic pulldown
150_initial_3
-0.3
+0.1
+0.4
N.D.
N.D.
magnetic pulldown
30_an_mag_2
-0.1
+0.2
+0.1
N.D.
N.D.
magnetic pulldown
30_mag_1
-0.2
+0.2
+0.2
N.D.
N.D.
magnetic pulldown
150_mag_1
-0.2
-0.0
+0.5
N.D.
N.D.
magnetic pulldown
150_initial_1
-0.0
+0.2
+0.3
N.D.
N.D.
magnetic pulldown
150_mag_2
-0.2
+0.3
+0.3
N.D.
N.D.
magnetic pulldown
150_nonmag_3
+0.1
-0.2
+0.6
N.D.
N.D.
magnetic pulldown
150_nonmag_2
-0.1
-0.0
+0.8
N.D.
N.D.
magnetic pulldown
150_mag_3
-0.1
+0.3
+0.5
N.D.
N.D.
magnetic pulldown
150_initial_2
-0.0
+0.1
+0.7
N.D.
N.D.
magnetic pulldown
30_initial_3
-0.1
+0.3
+0.6
N.D.
N.D.
magnetic pulldown
30_initial_1
+0.1
+0.3
+0.5
N.D.
N.D.
magnetic pulldown
30_mag_3
+0.0
+0.3
+0.5
N.D.
N.D.
carbon source
carbonsource_succinate
+0.1
+0.3
+0.6
N.D.
N.D.
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