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Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS12385 and AMB_RS12390 are separated by 38 nucleotides
AMB_RS12390 and AMB_RS12395 overlap by 4 nucleotides
AMB_RS12395 and AMB_RS12400 are separated by 20 nucleotides
AMB_RS12400 and AMB_RS12405 are separated by 91 nucleotides
AMB_RS12385: AMB_RS12385 - alanine--glyoxylate aminotransferase family protein, at 2,640,798 to 2,642,000
_RS12385
AMB_RS12390: AMB_RS12390 - transcription-repair coupling factor, at 2,642,039 to 2,645,518
_RS12390
AMB_RS12395: AMB_RS12395 - succinate dehydrogenase assembly factor 2, at 2,645,515 to 2,645,832
_RS12395
AMB_RS12400: AMB_RS12400 - ATP-dependent DNA helicase RecG, at 2,645,853 to 2,647,934
_RS12400
AMB_RS12405: AMB_RS12405 - UPF0016 domain-containing protein, at 2,648,026 to 2,648,607
_RS12405
Group
Condition
AMB
_RS12385
AMB
_RS12390
AMB
_RS12395
AMB
_RS12400
AMB
_RS12405
magnetic pulldown
30_an_nonmag_2
-3.9
-0.9
-0.6
N.D.
-0.2
magnetic pulldown
30_an_nonmag_3
-3.6
-0.8
-0.5
N.D.
+0.2
magnetic pulldown
30_an_nonmag_1
-2.4
-0.5
-0.7
N.D.
-0.9
magnetic pulldown
an_mag_3
-0.3
-0.0
-0.1
N.D.
-2.4
magnetic pulldown
150_an_nonmag_1
-2.1
-0.5
-0.1
N.D.
-0.1
magnetic pulldown
30_an_initial_2
-1.2
-0.5
-0.2
N.D.
-0.5
magnetic pulldown
150_an_nonmag_3
-1.6
-0.5
-0.1
N.D.
-0.1
magnetic pulldown
30_an_mag_3
-1.3
-0.3
+0.0
N.D.
-0.6
magnetic pulldown
without_iron1
-0.4
-0.5
-1.0
N.D.
-0.1
magnetic pulldown
30_an_initial_1
-0.7
-0.4
-0.4
N.D.
-0.5
magnetic pulldown
150_an_nonmag_2
-1.7
-0.5
+0.1
N.D.
+0.2
magnetic pulldown
without_iron3
-0.2
-0.4
-0.7
N.D.
-0.6
magnetic pulldown
30_an_initial_3
-1.0
-0.3
-0.3
N.D.
-0.3
magnetic pulldown
30_an_mag_1
-1.2
-0.2
-0.0
N.D.
-0.4
carbon source
carbonsource_all
-1.4
-0.4
-0.1
N.D.
+0.4
magnetic pulldown
30_nonmag_1
-0.3
-0.6
-1.1
N.D.
+0.5
magnetic pulldown
30_nonmag_2
-0.4
-0.9
-0.3
N.D.
+0.1
magnetic pulldown
150_nonmag_1
-0.4
-0.4
-0.9
N.D.
+0.5
magnetic pulldown
30_initial_1
+0.0
-0.6
-0.8
N.D.
+0.1
magnetic pulldown
150_initial_3
-0.0
-0.5
-0.4
N.D.
-0.2
magnetic pulldown
30_initial_3
+0.1
-0.5
-1.0
N.D.
+0.3
magnetic pulldown
30_an_mag_2
-0.8
-0.2
+0.3
N.D.
-0.4
magnetic pulldown
30_initial_2
+0.2
-0.4
-1.0
N.D.
+0.2
magnetic pulldown
150_nonmag_2
+0.5
-0.3
-0.9
N.D.
+0.1
magnetic pulldown
150_initial_2
+0.6
-0.3
-0.8
N.D.
+0.1
magnetic pulldown
150_nonmag_3
+0.2
-0.5
-0.9
N.D.
+0.8
magnetic pulldown
150_initial_1
+0.3
-0.5
-0.3
N.D.
+0.5
magnetic pulldown
30_nonmag_3
+0.4
-0.5
-0.4
N.D.
+0.7
magnetic pulldown
30_mag_3
+0.4
-0.4
-0.2
N.D.
+0.4
carbon source
carbonsource_succinate
+1.3
-0.1
-0.7
N.D.
-0.1
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