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Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS11990 and AMB_RS11995 are separated by 119 nucleotides
AMB_RS11995 and AMB_RS12000 overlap by 4 nucleotides
AMB_RS12000 and AMB_RS12005 are separated by 1 nucleotides
AMB_RS12005 and AMB_RS12010 are separated by 74 nucleotides
AMB_RS11990: AMB_RS11990 - acetylornithine deacetylase, at 2,580,022 to 2,581,236
_RS11990
AMB_RS11995: AMB_RS11995 - ABC protease/lipase transporter ATPase/permease, at 2,581,356 to 2,583,152
_RS11995
AMB_RS12000: AMB_RS12000 - lantibiotic ABC transporter, at 2,583,149 to 2,585,323
_RS12000
AMB_RS12005: AMB_RS12005 - HlyD family type I secretion periplasmic adaptor subunit, at 2,585,325 to 2,586,731
_RS12005
AMB_RS12010: AMB_RS12010 - single-stranded DNA-binding protein, at 2,586,806 to 2,587,309
_RS12010
Group
Condition
AMB
_RS11990
AMB
_RS11995
AMB
_RS12000
AMB
_RS12005
AMB
_RS12010
magnetic pulldown
150_mag_1
+0.0
-0.2
-0.4
-0.1
N.D.
magnetic pulldown
30_mag_2
+0.1
-0.2
-0.3
-0.1
N.D.
magnetic pulldown
150_mag_2
+0.2
-0.1
-0.4
-0.1
N.D.
magnetic pulldown
an_mag_3
-0.1
-0.3
-0.0
+0.1
N.D.
magnetic pulldown
30_mag_3
+0.2
-0.1
-0.2
-0.2
N.D.
magnetic pulldown
150_initial_3
+0.3
-0.1
-0.1
-0.3
N.D.
magnetic pulldown
30_mag_1
+0.1
-0.1
-0.1
-0.1
N.D.
magnetic pulldown
150_initial_2
+0.4
-0.1
-0.1
-0.0
N.D.
carbon source
carbonsource_succinate
+0.0
+0.1
+0.1
+0.2
N.D.
magnetic pulldown
without_iron3
+0.1
+0.2
-0.0
+0.1
N.D.
magnetic pulldown
30_initial_2
+0.0
+0.2
+0.1
+0.2
N.D.
magnetic pulldown
without_iron1
+0.0
+0.2
+0.2
+0.2
N.D.
magnetic pulldown
30_initial_3
-0.1
+0.2
+0.2
+0.4
N.D.
magnetic pulldown
150_an_nonmag_3
+0.3
-0.0
+0.1
+0.3
N.D.
magnetic pulldown
30_an_initial_3
+0.0
+0.3
+0.4
+0.1
N.D.
magnetic pulldown
30_initial_1
+0.2
+0.3
+0.1
+0.3
N.D.
magnetic pulldown
30_nonmag_1
+0.4
+0.2
+0.2
+0.3
N.D.
magnetic pulldown
30_an_initial_1
+0.0
+0.4
+0.5
+0.5
N.D.
magnetic pulldown
30_an_initial_2
+0.0
+0.4
+0.6
+0.4
N.D.
magnetic pulldown
30_nonmag_3
+0.3
+0.7
+0.7
+0.8
N.D.
magnetic pulldown
150_nonmag_1
+0.4
+0.6
+0.6
+0.9
N.D.
magnetic pulldown
30_an_nonmag_2
+0.1
+0.9
+1.0
+1.0
N.D.
carbon source
carbonsource_all
+0.0
+1.1
+1.1
+0.9
N.D.
magnetic pulldown
30_nonmag_2
+0.4
+1.0
+0.8
+1.0
N.D.
magnetic pulldown
150_an_nonmag_1
-0.7
+1.4
+1.4
+1.3
N.D.
magnetic pulldown
150_an_nonmag_2
+0.1
+1.2
+1.1
+1.2
N.D.
magnetic pulldown
150_nonmag_3
+0.6
+1.1
+1.0
+1.2
N.D.
magnetic pulldown
150_nonmag_2
+0.3
+1.9
+1.8
+1.5
N.D.
magnetic pulldown
30_an_nonmag_3
+0.2
+1.9
+2.0
+2.1
N.D.
magnetic pulldown
30_an_nonmag_1
+0.2
+2.5
+2.4
+2.7
N.D.
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