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Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS09135 and AMB_RS09140 are separated by 248 nucleotides
AMB_RS09140 and AMB_RS09145 are separated by 46 nucleotides
AMB_RS09145 and AMB_RS09150 overlap by 4 nucleotides
AMB_RS09150 and AMB_RS09155 are separated by 87 nucleotides
AMB_RS09135: AMB_RS09135 - branched-chain amino acid ABC transporter permease, at 1,944,314 to 1,945,228
_RS09135
AMB_RS09140: AMB_RS09140 - methyl-accepting chemotaxis protein, at 1,945,477 to 1,947,156
_RS09140
AMB_RS09145: AMB_RS09145 - copper-translocating P-type ATPase, at 1,947,203 to 1,949,410
_RS09145
AMB_RS09150: AMB_RS09150 - Cu(I)-responsive transcriptional regulator, at 1,949,407 to 1,949,799
_RS09150
AMB_RS09155: AMB_RS09155 - divergent polysaccharide deacetylase family protein, at 1,949,887 to 1,950,987
_RS09155
Group
Condition
AMB
_RS09135
AMB
_RS09140
AMB
_RS09145
AMB
_RS09150
AMB
_RS09155
magnetic pulldown
150_an_nonmag_1
-0.3
-0.5
N.D.
-1.1
-0.0
magnetic pulldown
30_an_nonmag_3
-0.7
-0.5
N.D.
-0.2
-0.1
magnetic pulldown
an_mag_3
+0.0
-0.5
N.D.
-0.6
-0.1
magnetic pulldown
150_an_nonmag_2
-0.6
-0.1
N.D.
+0.0
-0.5
magnetic pulldown
150_mag_1
+0.2
-0.4
N.D.
-0.7
-0.2
carbon source
carbonsource_succinate
-0.0
-0.1
N.D.
-0.5
-0.2
magnetic pulldown
150_nonmag_3
+0.0
-0.1
N.D.
-0.5
-0.2
magnetic pulldown
30_initial_2
-0.0
-0.2
N.D.
-0.5
-0.0
magnetic pulldown
30_nonmag_1
-0.0
-0.3
N.D.
-0.5
+0.0
carbon source
carbonsource_all
-0.1
-0.4
N.D.
-0.1
-0.0
magnetic pulldown
150_nonmag_2
-0.2
+0.1
N.D.
-0.1
-0.4
magnetic pulldown
30_mag_1
+0.0
-0.2
N.D.
-0.4
-0.0
magnetic pulldown
150_initial_2
-0.2
+0.0
N.D.
-0.2
-0.2
magnetic pulldown
30_nonmag_3
-0.0
-0.2
N.D.
+0.0
-0.2
magnetic pulldown
30_an_nonmag_2
-0.7
-0.3
N.D.
+0.6
+0.0
magnetic pulldown
without_iron3
-0.3
+0.1
N.D.
-0.2
-0.0
magnetic pulldown
30_an_initial_1
-0.3
-0.3
N.D.
+0.5
-0.1
magnetic pulldown
30_nonmag_2
-0.2
-0.4
N.D.
+0.5
-0.1
magnetic pulldown
150_mag_3
-0.1
+0.1
N.D.
-0.2
-0.1
magnetic pulldown
30_an_mag_1
-0.3
-0.0
N.D.
+0.3
-0.1
magnetic pulldown
30_an_initial_3
-0.3
-0.1
N.D.
+0.3
-0.0
magnetic pulldown
30_an_mag_2
-0.3
+0.2
N.D.
+0.1
+0.0
magnetic pulldown
30_initial_1
+0.1
-0.2
N.D.
+0.1
+0.0
magnetic pulldown
30_an_mag_3
-0.3
+0.0
N.D.
+0.4
-0.0
magnetic pulldown
30_an_initial_2
-0.1
-0.0
N.D.
+0.1
+0.1
magnetic pulldown
150_an_nonmag_3
-0.4
+0.2
N.D.
+0.6
-0.2
magnetic pulldown
30_initial_3
-0.1
+0.2
N.D.
+0.4
-0.3
magnetic pulldown
30_an_nonmag_1
-1.1
-0.2
N.D.
+1.4
+0.2
magnetic pulldown
without_iron2
+0.2
-0.1
N.D.
+0.4
+0.0
magnetic pulldown
150_initial_3
-0.1
+0.2
N.D.
+0.4
+0.2
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