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Cofit
Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS23750 and AMB_RS09080 overlap by 4 nucleotides
AMB_RS09080 and AMB_RS09085 are separated by 90 nucleotides
AMB_RS09085 and AMB_RS09090 are separated by 155 nucleotides
AMB_RS09090 and AMB_RS09095 overlap by 4 nucleotides
AMB_RS23750: AMB_RS23750 - modified peptide precursor CbpA, at 1,933,690 to 1,933,806
_RS23750
AMB_RS09080: AMB_RS09080 - peptide-modifying radical SAM enzyme CbpB, at 1,933,803 to 1,935,182
_RS09080
AMB_RS09085: AMB_RS09085 - DUF4189 domain-containing protein, at 1,935,273 to 1,935,632
_RS09085
AMB_RS09090: AMB_RS09090 - hypothetical protein, at 1,935,788 to 1,936,960
_RS09090
AMB_RS09095: AMB_RS09095 - hypothetical protein, at 1,936,957 to 1,937,424
_RS09095
Group
Condition
AMB
_RS23750
AMB
_RS09080
AMB
_RS09085
AMB
_RS09090
AMB
_RS09095
magnetic pulldown
30_an_mag_1
-0.6
-0.2
+0.3
-0.7
-2.8
magnetic pulldown
30_an_mag_2
-0.4
-0.2
+0.2
-1.0
-2.2
magnetic pulldown
30_an_initial_2
-0.5
-0.1
+0.2
-0.1
-2.5
magnetic pulldown
30_an_initial_1
-0.5
-0.2
+0.3
-0.3
-2.2
magnetic pulldown
30_an_mag_3
-0.4
-0.1
+0.3
-0.6
-2.0
magnetic pulldown
30_an_initial_3
-0.2
-0.1
+0.3
-0.1
-1.8
carbon source
carbonsource_all
-0.0
+0.0
-0.2
-0.3
-1.1
magnetic pulldown
30_an_nonmag_3
-0.7
-0.2
+0.2
+0.4
-1.2
magnetic pulldown
150_mag_3
+0.0
-0.1
+0.2
-0.5
-0.8
magnetic pulldown
150_mag_1
+0.0
-0.0
+0.5
-0.5
-1.2
magnetic pulldown
30_mag_1
+0.0
-0.0
-0.1
-0.4
-0.7
magnetic pulldown
150_an_nonmag_2
-0.3
-0.1
-0.1
+0.4
-1.1
magnetic pulldown
30_an_nonmag_2
-0.4
-0.3
+0.2
+0.3
-0.9
magnetic pulldown
30_mag_2
+0.1
-0.1
+0.1
-0.3
-0.8
magnetic pulldown
150_an_nonmag_1
-0.9
-0.1
+0.4
+0.5
-0.9
magnetic pulldown
150_an_nonmag_3
-0.2
-0.2
+0.5
+0.7
-1.8
magnetic pulldown
150_mag_2
+0.1
-0.1
+0.2
-0.4
-0.8
magnetic pulldown
30_mag_3
+0.2
-0.0
+0.1
-0.1
-0.9
magnetic pulldown
without_iron3
+0.3
-0.1
-0.1
+0.1
-1.0
magnetic pulldown
30_an_nonmag_1
+0.0
-0.1
-0.1
+0.9
-1.4
magnetic pulldown
150_initial_2
+0.4
-0.0
+0.1
-0.0
-1.0
magnetic pulldown
without_iron1
+0.3
-0.0
+0.3
-0.1
-0.9
magnetic pulldown
150_nonmag_1
+0.3
-0.1
+0.0
+0.2
-0.8
magnetic pulldown
150_initial_3
+0.3
-0.2
+0.2
-0.1
-0.7
magnetic pulldown
without_iron2
+0.4
-0.2
+0.2
-0.0
-0.7
magnetic pulldown
30_nonmag_3
+0.3
-0.3
+0.1
+0.1
-0.4
magnetic pulldown
150_initial_1
+0.4
-0.0
+0.2
+0.0
-0.9
magnetic pulldown
30_nonmag_2
+0.4
+0.1
-0.1
+0.2
-0.4
magnetic pulldown
an_mag_3
+0.5
+0.2
-0.1
+0.0
-0.3
magnetic pulldown
150_nonmag_2
+0.2
-0.1
+0.5
+0.2
+0.6
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