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Cofit
Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS07890 and AMB_RS07895 are separated by 26 nucleotides
AMB_RS07895 and AMB_RS07900 are separated by 17 nucleotides
AMB_RS07900 and AMB_RS07905 overlap by 29 nucleotides
AMB_RS07905 and AMB_RS07910 overlap by 1 nucleotides
AMB_RS07890: AMB_RS07890 - ferredoxin III, nif-specific, at 1,694,594 to 1,694,893
_RS07890
AMB_RS07895: AMB_RS07895 - DUF269 domain-containing protein, at 1,694,920 to 1,695,366
_RS07895
AMB_RS07900: AMB_RS07900 - nitrogen fixation protein NifX, at 1,695,384 to 1,695,884
_RS07900
AMB_RS07905: AMB_RS07905 - nitrogenase iron-molybdenum cofactor biosynthesis protein NifN, at 1,695,856 to 1,697,214
_RS07905
AMB_RS07910: AMB_RS07910 - nitrogenase iron-molybdenum cofactor biosynthesis protein NifE, at 1,697,214 to 1,698,596
_RS07910
Group
Condition
AMB
_RS07890
AMB
_RS07895
AMB
_RS07900
AMB
_RS07905
AMB
_RS07910
magnetic pulldown
150_nonmag_2
-1.2
-0.6
-1.3
+0.5
+0.3
magnetic pulldown
an_mag_3
+0.6
-0.6
-0.8
-0.3
+0.2
magnetic pulldown
30_mag_1
-0.2
+0.1
-0.4
-0.3
-0.0
magnetic pulldown
150_initial_2
-1.0
+0.0
-0.1
+0.2
+0.0
magnetic pulldown
150_mag_2
-0.2
-0.1
-0.2
+0.1
-0.2
magnetic pulldown
30_mag_2
+0.1
+0.1
-0.4
-0.1
-0.0
magnetic pulldown
without_iron1
-0.2
+0.1
-0.3
+0.0
+0.0
magnetic pulldown
150_initial_1
-0.5
+0.3
-0.3
+0.2
+0.0
carbon source
carbonsource_all
-0.6
+0.2
+0.4
-0.2
-0.0
magnetic pulldown
30_an_initial_3
-0.1
+0.1
-0.2
-0.2
+0.2
magnetic pulldown
150_an_nonmag_1
+0.4
-0.1
-1.1
-0.0
+0.7
magnetic pulldown
30_nonmag_3
-0.3
+0.2
+0.2
-0.2
-0.0
magnetic pulldown
30_an_nonmag_2
-0.1
+0.1
-0.2
-0.2
+0.3
carbon source
carbonsource_succinate
-0.3
+0.3
+0.0
+0.1
-0.0
magnetic pulldown
150_nonmag_3
-0.2
+0.2
+0.0
-0.2
+0.2
magnetic pulldown
30_mag_3
-0.1
+0.4
-0.1
-0.1
-0.1
magnetic pulldown
150_nonmag_1
-0.3
+0.2
-0.1
+0.1
+0.2
magnetic pulldown
without_iron3
-0.2
+0.1
-0.3
+0.4
+0.1
magnetic pulldown
30_an_mag_3
-0.1
-0.1
+0.2
+0.2
+0.0
magnetic pulldown
150_an_nonmag_3
-0.3
-0.2
-0.1
+0.4
+0.4
magnetic pulldown
30_initial_1
-0.2
+0.2
-0.1
+0.2
+0.1
magnetic pulldown
30_an_initial_2
-0.1
-0.2
+0.5
+0.0
+0.2
magnetic pulldown
30_nonmag_2
+0.2
-0.1
-0.3
+0.6
+0.0
magnetic pulldown
30_nonmag_1
+0.2
-0.0
-0.2
+0.4
+0.2
magnetic pulldown
30_an_nonmag_3
+0.4
-0.2
-0.2
+0.1
+0.4
magnetic pulldown
30_initial_2
+0.4
+0.1
-0.2
+0.3
+0.0
magnetic pulldown
30_initial_3
+0.1
+0.3
+0.2
+0.1
+0.1
magnetic pulldown
30_an_initial_1
-0.0
+0.1
+0.7
-0.1
+0.1
magnetic pulldown
30_an_nonmag_1
+0.3
-0.3
+0.9
-0.6
+0.7
magnetic pulldown
150_an_nonmag_2
+0.1
+0.1
+0.3
+0.7
+0.4
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