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Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS07445 and AMB_RS07450 overlap by 16 nucleotides
AMB_RS07450 and AMB_RS07455 overlap by 4 nucleotides
AMB_RS07455 and AMB_RS07460 overlap by 4 nucleotides
AMB_RS07460 and AMB_RS07465 are separated by 78 nucleotides
AMB_RS07445: AMB_RS07445 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 1,611,927 to 1,612,481
_RS07445
AMB_RS07450: AMB_RS07450 - ABC transporter ATP-binding protein, at 1,612,466 to 1,613,170
_RS07450
AMB_RS07455: AMB_RS07455 - ABC transporter ATP-binding protein, at 1,613,167 to 1,613,952
_RS07455
AMB_RS07460: AMB_RS07460 - ABC transporter permease, at 1,613,949 to 1,615,805
_RS07460
AMB_RS07465: AMB_RS07465 - ABC transporter substrate-binding protein, at 1,615,884 to 1,617,092
_RS07465
Group
Condition
AMB
_RS07445
AMB
_RS07450
AMB
_RS07455
AMB
_RS07460
AMB
_RS07465
magnetic pulldown
an_mag_3
+0.0
-0.2
-1.7
+0.0
-0.2
magnetic pulldown
150_an_nonmag_2
-1.3
-0.3
+0.3
+0.1
-0.0
magnetic pulldown
30_an_nonmag_1
-0.9
-0.0
-0.1
+0.1
+0.0
magnetic pulldown
30_an_nonmag_2
-0.7
-0.2
-0.0
+0.2
-0.0
magnetic pulldown
30_an_nonmag_3
-1.0
-0.2
+0.2
+0.0
+0.2
magnetic pulldown
30_nonmag_3
-0.4
-0.2
+0.1
-0.0
-0.2
magnetic pulldown
30_mag_1
-0.1
+0.1
-0.3
-0.0
-0.2
magnetic pulldown
30_nonmag_1
-0.3
-0.0
+0.0
-0.0
-0.2
magnetic pulldown
30_an_mag_2
-0.0
-0.3
+0.0
+0.1
-0.1
magnetic pulldown
150_mag_1
+0.1
-0.1
+0.1
-0.0
-0.2
magnetic pulldown
30_an_initial_1
+0.1
-0.3
+0.1
+0.0
-0.1
magnetic pulldown
150_initial_1
+0.1
-0.1
+0.1
-0.0
-0.2
magnetic pulldown
30_an_mag_3
+0.1
-0.2
+0.0
+0.1
-0.1
carbon source
carbonsource_succinate
-0.3
-0.1
+0.5
+0.0
-0.1
magnetic pulldown
150_nonmag_2
+0.5
-0.6
+0.2
-0.0
-0.1
magnetic pulldown
30_initial_1
+0.1
-0.0
-0.1
+0.1
-0.2
magnetic pulldown
30_an_initial_3
-0.0
-0.2
+0.1
+0.2
-0.0
magnetic pulldown
150_an_nonmag_3
-0.3
+0.2
+0.0
+0.2
-0.0
magnetic pulldown
150_an_nonmag_1
-0.2
-0.1
+0.2
+0.1
+0.0
magnetic pulldown
150_nonmag_1
-0.2
-0.1
+0.3
+0.0
+0.0
magnetic pulldown
30_mag_3
-0.1
+0.1
+0.4
-0.1
-0.2
magnetic pulldown
150_initial_3
+0.3
-0.2
+0.1
+0.0
-0.1
magnetic pulldown
30_nonmag_2
-0.2
-0.0
+0.6
+0.0
-0.3
magnetic pulldown
30_initial_2
+0.0
-0.1
+0.3
+0.1
-0.2
magnetic pulldown
without_iron3
+0.2
-0.2
+0.3
-0.0
-0.1
magnetic pulldown
150_mag_2
+0.1
+0.1
+0.2
-0.1
-0.1
magnetic pulldown
30_an_initial_2
+0.2
-0.2
+0.0
+0.1
+0.1
magnetic pulldown
without_iron1
+0.0
-0.1
+0.3
+0.1
-0.0
magnetic pulldown
150_nonmag_3
+0.1
-0.2
+0.4
+0.1
-0.0
magnetic pulldown
150_mag_3
+0.1
+0.1
+0.3
+0.1
-0.1
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