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Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS05400 and AMB_RS05405 are separated by 5 nucleotides
AMB_RS05405 and AMB_RS05410 are separated by 7 nucleotides
AMB_RS05410 and AMB_RS05415 are separated by 13 nucleotides
AMB_RS05415 and AMB_RS05420 are separated by 17 nucleotides
AMB_RS05400: AMB_RS05400 - fumarate reductase/succinate dehydrogenase flavoprotein subunit, at 1,118,543 to 1,120,267
_RS05400
AMB_RS05405: AMB_RS05405 - 4Fe-4S dicluster domain-containing protein, at 1,120,273 to 1,120,494
_RS05405
AMB_RS05410: AMB_RS05410 - HEAT repeat-containing protein, at 1,120,502 to 1,121,437
_RS05410
AMB_RS05415: AMB_RS05415 - 4Fe-4S binding protein, at 1,121,451 to 1,122,563
_RS05415
AMB_RS05420: AMB_RS05420 - ferredoxin, at 1,122,581 to 1,122,880
_RS05420
Group
Condition
AMB
_RS05400
AMB
_RS05405
AMB
_RS05410
AMB
_RS05415
AMB
_RS05420
magnetic pulldown
30_an_nonmag_2
-0.2
-1.6
-0.1
-0.2
-0.2
magnetic pulldown
30_an_initial_1
-0.2
-1.0
-0.3
-0.0
-0.6
carbon source
carbonsource_all
-0.0
-1.1
-0.3
-0.1
-0.5
magnetic pulldown
30_an_nonmag_1
-0.3
-0.2
-0.1
+0.2
-1.0
magnetic pulldown
30_an_nonmag_3
-0.1
-0.4
-0.2
+0.1
-0.6
magnetic pulldown
150_an_nonmag_3
-0.2
-0.8
+0.1
+0.0
-0.4
magnetic pulldown
30_an_mag_1
+0.1
-0.0
+0.0
-0.1
-0.7
magnetic pulldown
150_an_nonmag_2
-0.0
+0.4
-0.1
+0.3
-1.2
magnetic pulldown
without_iron1
+0.0
-0.8
-0.4
+0.2
+0.3
magnetic pulldown
30_an_initial_3
+0.1
+0.0
-0.2
+0.1
-0.5
magnetic pulldown
30_an_mag_2
+0.0
-0.0
+0.1
-0.1
-0.5
magnetic pulldown
30_mag_3
+0.0
-0.6
+0.3
+0.0
-0.1
magnetic pulldown
150_nonmag_2
-0.1
-1.1
+1.0
+0.1
-0.1
magnetic pulldown
150_nonmag_3
+0.0
-1.0
+0.4
+0.2
+0.3
magnetic pulldown
150_mag_3
-0.0
-0.8
+0.7
-0.0
+0.1
magnetic pulldown
without_iron3
-0.1
-0.2
+0.3
-0.0
+0.1
magnetic pulldown
150_initial_2
+0.1
-0.2
+0.4
-0.0
-0.1
magnetic pulldown
150_an_nonmag_1
+0.1
+0.7
-0.1
-0.1
-0.4
magnetic pulldown
30_mag_1
-0.0
-0.0
-0.3
+0.3
+0.2
magnetic pulldown
150_nonmag_1
-0.1
-0.6
+0.4
+0.0
+0.4
magnetic pulldown
without_iron2
+0.0
-0.5
+0.4
+0.1
+0.2
magnetic pulldown
30_an_initial_2
-0.0
+0.7
-0.1
+0.2
-0.4
magnetic pulldown
an_mag_3
+0.1
+0.7
+0.4
-0.3
-0.6
magnetic pulldown
30_initial_3
+0.1
-0.3
+0.4
+0.2
+0.2
magnetic pulldown
30_nonmag_3
+0.0
+0.3
-0.1
+0.2
+0.1
magnetic pulldown
30_initial_2
-0.0
+0.3
+0.3
+0.2
-0.0
carbon source
carbonsource_succinate
-0.1
+0.5
+0.2
+0.2
+0.0
magnetic pulldown
30_nonmag_2
+0.1
+0.5
-0.3
+0.3
+0.2
magnetic pulldown
30_nonmag_1
+0.0
+0.3
+0.4
+0.0
+0.2
magnetic pulldown
30_initial_1
-0.0
+0.5
+0.5
+0.0
+0.3
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