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Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS05375 and AMB_RS05385 are separated by 341 nucleotides
AMB_RS05385 and AMB_RS05390 are separated by 50 nucleotides
AMB_RS05390 and AMB_RS23990 are separated by 11 nucleotides
AMB_RS23990 and AMB_RS23995 are separated by 6 nucleotides
AMB_RS05375: AMB_RS05375 - helix-turn-helix domain-containing protein, at 1,115,360 to 1,115,728
_RS05375
AMB_RS05385: AMB_RS05385 - cystathionine beta-synthase, at 1,116,070 to 1,117,098
_RS05385
AMB_RS05390: AMB_RS05390 - Rrf2 family transcriptional regulator, at 1,117,149 to 1,117,598
_RS05390
AMB_RS23990: AMB_RS23990 - aminotransferase class V-fold PLP-dependent enzyme, at 1,117,610 to 1,118,194
_RS23990
AMB_RS23995: AMB_RS23995 - hypothetical protein, at 1,118,201 to 1,118,419
_RS23995
Group
Condition
AMB
_RS05375
AMB
_RS05385
AMB
_RS05390
AMB
_RS23990
AMB
_RS23995
magnetic pulldown
150_an_nonmag_3
+0.0
N.D.
N.D.
-0.4
N.D.
magnetic pulldown
without_iron3
-0.3
N.D.
N.D.
-0.0
N.D.
magnetic pulldown
150_nonmag_2
-0.8
N.D.
N.D.
+0.6
N.D.
magnetic pulldown
150_mag_1
-0.0
N.D.
N.D.
-0.2
N.D.
magnetic pulldown
150_mag_2
-0.1
N.D.
N.D.
-0.1
N.D.
magnetic pulldown
30_nonmag_1
-0.2
N.D.
N.D.
+0.0
N.D.
magnetic pulldown
150_nonmag_3
-0.2
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
without_iron1
-0.2
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
150_nonmag_1
-0.2
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
30_mag_3
-0.0
N.D.
N.D.
-0.1
N.D.
magnetic pulldown
150_initial_3
-0.1
N.D.
N.D.
+0.0
N.D.
magnetic pulldown
30_nonmag_3
-0.1
N.D.
N.D.
+0.0
N.D.
carbon source
carbonsource_all
-0.0
N.D.
N.D.
-0.0
N.D.
magnetic pulldown
30_initial_2
-0.1
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
30_mag_1
-0.1
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
150_mag_3
-0.0
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
an_mag_3
+0.1
N.D.
N.D.
-0.1
N.D.
magnetic pulldown
30_initial_3
-0.0
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
30_an_mag_2
+0.1
N.D.
N.D.
-0.1
N.D.
magnetic pulldown
30_an_nonmag_3
-0.0
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
30_an_nonmag_1
-0.0
N.D.
N.D.
+0.2
N.D.
magnetic pulldown
30_an_initial_1
+0.2
N.D.
N.D.
-0.0
N.D.
magnetic pulldown
30_an_initial_2
+0.2
N.D.
N.D.
+0.0
N.D.
magnetic pulldown
30_an_mag_1
+0.2
N.D.
N.D.
-0.0
N.D.
magnetic pulldown
30_nonmag_2
-0.1
N.D.
N.D.
+0.3
N.D.
magnetic pulldown
30_an_mag_3
+0.2
N.D.
N.D.
+0.1
N.D.
carbon source
carbonsource_succinate
-0.0
N.D.
N.D.
+0.4
N.D.
magnetic pulldown
30_an_initial_3
+0.2
N.D.
N.D.
+0.1
N.D.
magnetic pulldown
150_an_nonmag_1
+0.1
N.D.
N.D.
+0.4
N.D.
magnetic pulldown
150_an_nonmag_2
+0.2
N.D.
N.D.
+0.4
N.D.
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