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Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS04555 and AMB_RS04560 are separated by 87 nucleotides
AMB_RS04560 and AMB_RS04565 are separated by 104 nucleotides
AMB_RS04565 and AMB_RS04570 overlap by 4 nucleotides
AMB_RS04570 and AMB_RS04575 are separated by 105 nucleotides
AMB_RS04555: AMB_RS04555 - TRAP transporter small permease, at 953,984 to 954,682
_RS04555
AMB_RS04560: AMB_RS04560 - C4-dicarboxylate ABC transporter, at 954,770 to 955,783
_RS04560
AMB_RS04565: AMB_RS04565 - PAS domain-containing sensor histidine kinase, at 955,888 to 957,855
_RS04565
AMB_RS04570: AMB_RS04570 - DNA-binding response regulator, at 957,852 to 958,454
_RS04570
AMB_RS04575: AMB_RS04575 - DNA-binding response regulator, at 958,560 to 959,210
_RS04575
Group
Condition
AMB
_RS04555
AMB
_RS04560
AMB
_RS04565
AMB
_RS04570
AMB
_RS04575
magnetic pulldown
30_an_nonmag_1
-0.1
-0.6
-0.5
N.D.
-1.3
magnetic pulldown
an_mag_3
-1.1
+0.1
-0.1
N.D.
-0.5
magnetic pulldown
30_nonmag_3
-0.3
-0.1
-0.0
N.D.
-0.8
magnetic pulldown
30_an_nonmag_2
-0.1
-0.3
-0.3
N.D.
-0.3
magnetic pulldown
30_nonmag_2
+0.3
+0.1
+0.1
N.D.
-1.4
magnetic pulldown
150_an_nonmag_1
-0.7
-0.3
+0.2
N.D.
+0.2
magnetic pulldown
150_nonmag_1
+0.2
-0.2
-0.0
N.D.
-0.6
magnetic pulldown
150_an_nonmag_3
-0.4
-0.4
-0.1
N.D.
+0.4
magnetic pulldown
30_an_nonmag_3
-0.5
-0.3
-0.2
N.D.
+0.4
magnetic pulldown
150_an_nonmag_2
-0.5
-0.1
-0.1
N.D.
+0.2
carbon source
carbonsource_succinate
+0.1
+1.1
-2.3
N.D.
+0.6
magnetic pulldown
150_initial_3
-0.1
+0.2
+0.3
N.D.
-0.6
magnetic pulldown
150_mag_1
-0.3
+0.3
+0.4
N.D.
-0.6
magnetic pulldown
150_nonmag_2
+0.6
-0.1
-0.0
N.D.
-0.3
magnetic pulldown
30_an_mag_3
-0.5
+0.2
-0.1
N.D.
+0.6
magnetic pulldown
30_an_initial_3
-0.5
+0.3
+0.1
N.D.
+0.4
magnetic pulldown
30_an_initial_2
-0.3
+0.2
+0.2
N.D.
+0.3
magnetic pulldown
30_an_initial_1
-0.3
+0.2
+0.0
N.D.
+0.5
magnetic pulldown
30_initial_2
-0.1
+0.4
+0.5
N.D.
-0.3
magnetic pulldown
without_iron1
-0.1
+0.5
+0.6
N.D.
-0.5
carbon source
carbonsource_all
-0.2
+0.7
+0.8
N.D.
-0.7
magnetic pulldown
30_initial_1
-0.1
+0.4
+0.5
N.D.
-0.1
magnetic pulldown
without_iron2
-0.1
+0.4
+0.5
N.D.
-0.1
magnetic pulldown
150_mag_2
-0.1
+0.3
+0.3
N.D.
+0.1
magnetic pulldown
150_initial_2
-0.0
+0.3
+0.5
N.D.
+0.1
magnetic pulldown
30_initial_3
-0.1
+0.4
+0.4
N.D.
+0.1
magnetic pulldown
150_mag_3
-0.0
+0.3
+0.3
N.D.
+0.4
magnetic pulldown
30_mag_3
-0.1
+0.4
+0.5
N.D.
+0.2
magnetic pulldown
30_mag_1
+0.0
+0.3
+0.5
N.D.
+0.4
magnetic pulldown
without_iron3
-0.0
+0.5
+0.6
N.D.
+0.4
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