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Cofit
Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS04025 and AMB_RS04030 are separated by 2 nucleotides
AMB_RS04030 and AMB_RS04035 overlap by 4 nucleotides
AMB_RS04035 and AMB_RS04040 are separated by 1 nucleotides
AMB_RS04040 and AMB_RS04045 are separated by 99 nucleotides
AMB_RS04025: AMB_RS04025 - glutathione S-transferase, at 843,544 to 844,149
_RS04025
AMB_RS04030: AMB_RS04030 - cupin, at 844,152 to 844,577
_RS04030
AMB_RS04035: AMB_RS04035 - hypothetical protein, at 844,574 to 845,050
_RS04035
AMB_RS04040: AMB_RS04040 - phosphatase, at 845,052 to 845,717
_RS04040
AMB_RS04045: AMB_RS04045 - B12-binding domain-containing radical SAM protein, at 845,817 to 847,313
_RS04045
Group
Condition
AMB
_RS04025
AMB
_RS04030
AMB
_RS04035
AMB
_RS04040
AMB
_RS04045
magnetic pulldown
150_nonmag_2
-1.7
+0.1
-0.9
-0.9
+0.3
carbon source
carbonsource_all
-0.8
+0.2
-1.2
-0.3
-0.8
magnetic pulldown
an_mag_3
+0.1
+0.2
-2.1
+0.0
-0.3
magnetic pulldown
30_an_nonmag_1
-1.4
+0.2
+0.2
-0.8
-0.2
magnetic pulldown
30_initial_1
-0.3
-0.1
-0.2
-0.3
-1.0
magnetic pulldown
30_initial_2
+0.0
+0.0
-0.5
-0.2
-1.1
magnetic pulldown
30_initial_3
-0.1
+0.0
-0.3
-0.2
-1.0
magnetic pulldown
150_an_nonmag_1
+0.1
+0.1
+0.2
-1.0
-0.8
magnetic pulldown
150_an_nonmag_3
-0.6
+0.1
+0.2
-0.7
-0.3
magnetic pulldown
30_an_nonmag_2
-1.0
+0.3
-0.0
-0.5
-0.1
magnetic pulldown
150_nonmag_3
-0.1
+0.0
-0.8
-0.4
-0.0
magnetic pulldown
30_an_initial_1
-0.4
+0.2
+0.2
-0.7
-0.4
magnetic pulldown
150_initial_2
-0.3
+0.1
-0.2
-0.3
-0.4
magnetic pulldown
30_an_nonmag_3
-0.5
+0.2
-0.1
-0.5
-0.1
magnetic pulldown
30_an_initial_3
-0.3
+0.1
+0.1
-0.4
-0.4
magnetic pulldown
150_mag_2
-0.0
+0.1
-0.0
-0.2
-0.6
magnetic pulldown
30_an_mag_2
-0.7
+0.1
+0.4
-0.4
-0.1
magnetic pulldown
150_mag_3
+0.1
-0.0
+0.1
-0.4
-0.4
magnetic pulldown
30_mag_1
-0.1
+0.1
+0.1
-0.4
-0.3
magnetic pulldown
30_mag_3
-0.5
-0.2
+0.3
+0.1
-0.3
magnetic pulldown
30_an_mag_1
-0.7
+0.3
+0.4
-0.3
-0.1
magnetic pulldown
30_an_mag_3
-0.6
+0.2
+0.5
-0.5
-0.0
magnetic pulldown
150_an_nonmag_2
-0.0
+0.2
+0.1
-0.5
-0.2
magnetic pulldown
150_initial_3
+0.4
+0.1
-0.1
-0.3
-0.4
magnetic pulldown
without_iron3
-0.3
+0.2
-0.1
-0.2
+0.2
magnetic pulldown
30_nonmag_3
-0.3
+0.2
+0.0
-0.2
+0.1
magnetic pulldown
30_an_initial_2
-0.3
+0.2
+0.5
-0.4
-0.0
magnetic pulldown
30_nonmag_1
+0.3
+0.0
-0.2
-0.4
+0.2
magnetic pulldown
30_mag_2
-0.2
+0.2
+0.5
-0.0
-0.3
magnetic pulldown
150_nonmag_1
+0.4
+0.2
+0.1
-0.5
+0.2
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