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Cofit
Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS03880 and AMB_RS03885 are separated by 107 nucleotides
AMB_RS03885 and AMB_RS03890 are separated by 13 nucleotides
AMB_RS03890 and AMB_RS03895 are separated by 92 nucleotides
AMB_RS03895 and AMB_RS03900 are separated by 128 nucleotides
AMB_RS03880: AMB_RS03880 - tetratricopeptide repeat-containing protein, at 814,871 to 815,638
_RS03880
AMB_RS03885: AMB_RS03885 - pentapeptide repeat-containing protein, at 815,746 to 816,240
_RS03885
AMB_RS03890: AMB_RS03890 - GGDEF domain-containing protein, at 816,254 to 817,312
_RS03890
AMB_RS03895: AMB_RS03895 - response regulator, at 817,405 to 818,133
_RS03895
AMB_RS03900: AMB_RS03900 - hypothetical protein, at 818,262 to 818,972
_RS03900
Group
Condition
AMB
_RS03880
AMB
_RS03885
AMB
_RS03890
AMB
_RS03895
AMB
_RS03900
magnetic pulldown
150_an_nonmag_2
-0.2
+0.1
-0.0
N.D.
-0.7
magnetic pulldown
30_an_nonmag_2
+0.1
-0.6
-0.1
N.D.
-0.2
magnetic pulldown
30_an_initial_1
+0.1
-0.3
-0.2
N.D.
-0.3
magnetic pulldown
30_an_mag_2
-0.0
-0.3
-0.1
N.D.
-0.2
magnetic pulldown
30_an_initial_2
-0.0
-0.2
-0.1
N.D.
-0.2
magnetic pulldown
30_an_mag_1
+0.2
-0.1
-0.2
N.D.
-0.3
magnetic pulldown
without_iron1
+0.0
-0.2
-0.0
N.D.
-0.1
magnetic pulldown
150_mag_1
+0.0
-0.4
+0.2
N.D.
-0.0
magnetic pulldown
30_an_mag_3
+0.2
-0.3
+0.0
N.D.
-0.1
magnetic pulldown
150_nonmag_3
+0.1
-0.1
-0.1
N.D.
-0.2
magnetic pulldown
30_mag_3
-0.0
-0.1
+0.1
N.D.
-0.0
magnetic pulldown
30_initial_2
+0.0
-0.1
-0.1
N.D.
+0.1
magnetic pulldown
150_an_nonmag_3
+0.0
+0.3
-0.3
N.D.
-0.0
magnetic pulldown
30_initial_3
-0.0
+0.2
-0.1
N.D.
-0.1
magnetic pulldown
30_mag_2
-0.1
-0.0
+0.1
N.D.
+0.0
magnetic pulldown
an_mag_3
+0.2
+0.4
-0.3
N.D.
-0.2
magnetic pulldown
30_mag_1
-0.0
+0.2
+0.0
N.D.
-0.1
magnetic pulldown
150_initial_3
-0.1
+0.4
+0.0
N.D.
-0.2
magnetic pulldown
30_an_initial_3
+0.1
+0.2
-0.1
N.D.
-0.1
magnetic pulldown
without_iron3
+0.0
+0.2
+0.0
N.D.
-0.1
magnetic pulldown
150_mag_3
+0.1
-0.0
-0.0
N.D.
+0.1
magnetic pulldown
30_nonmag_3
+0.1
-0.3
+0.1
N.D.
+0.3
magnetic pulldown
150_mag_2
-0.0
+0.1
-0.0
N.D.
+0.2
magnetic pulldown
150_nonmag_1
+0.1
+0.2
-0.2
N.D.
+0.2
carbon source
carbonsource_all
-0.1
+0.6
-0.1
N.D.
-0.1
magnetic pulldown
30_nonmag_1
-0.1
+0.1
-0.1
N.D.
+0.3
magnetic pulldown
30_nonmag_2
-0.1
+0.2
+0.1
N.D.
+0.1
magnetic pulldown
30_an_nonmag_3
+0.3
+0.2
+0.2
N.D.
-0.3
magnetic pulldown
30_an_nonmag_1
-0.1
+0.3
-0.3
N.D.
+0.8
magnetic pulldown
150_nonmag_2
+0.2
+0.1
+0.2
N.D.
+0.4
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