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Cofit
Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS03620 and AMB_RS03625 are separated by 54 nucleotides
AMB_RS03625 and AMB_RS03630 are separated by 108 nucleotides
AMB_RS03630 and AMB_RS03635 are separated by 147 nucleotides
AMB_RS03635 and AMB_RS03640 overlap by 20 nucleotides
AMB_RS03620: AMB_RS03620 - iron-dependent peroxidase, at 761,657 to 762,559
_RS03620
AMB_RS03625: AMB_RS03625 - hypothetical protein, at 762,614 to 763,990
_RS03625
AMB_RS03630: AMB_RS03630 - hypothetical protein, at 764,099 to 765,715
_RS03630
AMB_RS03635: AMB_RS03635 - tetratricopeptide repeat protein, at 765,863 to 768,139
_RS03635
AMB_RS03640: AMB_RS03640 - CoA transferase, at 768,120 to 769,226
_RS03640
Group
Condition
AMB
_RS03620
AMB
_RS03625
AMB
_RS03630
AMB
_RS03635
AMB
_RS03640
magnetic pulldown
an_mag_3
-0.1
-0.5
-0.2
+0.1
-0.2
magnetic pulldown
without_iron1
-0.0
-0.6
-0.0
+0.1
+0.0
magnetic pulldown
30_an_mag_1
-0.2
-0.4
+0.2
-0.0
+0.0
magnetic pulldown
150_mag_2
-0.1
-0.7
-0.1
+0.2
+0.3
carbon source
carbonsource_all
+0.1
-0.5
-0.0
+0.2
-0.2
magnetic pulldown
30_mag_2
+0.1
-0.6
-0.1
+0.1
+0.1
magnetic pulldown
150_mag_1
-0.2
-0.3
-0.1
+0.2
+0.2
magnetic pulldown
30_mag_3
-0.0
-0.4
+0.0
+0.1
+0.2
magnetic pulldown
150_mag_3
+0.1
-0.4
+0.1
+0.0
+0.1
magnetic pulldown
without_iron2
+0.0
-0.3
+0.1
-0.0
+0.2
magnetic pulldown
30_initial_3
-0.2
+0.0
-0.1
+0.1
+0.2
magnetic pulldown
30_an_nonmag_1
-0.2
+1.2
-0.7
-0.3
+0.0
magnetic pulldown
30_initial_2
-0.1
-0.1
+0.2
+0.1
+0.1
magnetic pulldown
30_an_initial_2
-0.2
+0.1
+0.1
+0.1
+0.1
magnetic pulldown
30_nonmag_3
+0.0
+0.6
-0.1
-0.1
-0.0
magnetic pulldown
150_initial_1
+0.1
-0.2
+0.2
+0.2
+0.2
magnetic pulldown
150_initial_2
+0.1
-0.1
+0.2
+0.1
+0.1
magnetic pulldown
30_an_initial_3
-0.1
+0.1
+0.2
+0.0
+0.2
magnetic pulldown
150_an_nonmag_2
-0.4
+1.2
-0.2
+0.1
-0.2
magnetic pulldown
30_an_nonmag_3
-0.5
+0.6
+0.2
+0.3
-0.0
carbon source
carbonsource_succinate
-0.1
+0.3
+0.3
+0.1
+0.1
magnetic pulldown
without_iron3
+0.0
+0.0
+0.3
+0.1
+0.2
magnetic pulldown
30_nonmag_2
-0.1
+0.4
+0.3
+0.2
+0.2
magnetic pulldown
30_an_nonmag_2
-0.4
+0.9
+0.1
+0.1
+0.3
magnetic pulldown
150_nonmag_3
-0.0
+1.1
+0.1
+0.2
-0.1
magnetic pulldown
150_an_nonmag_3
+0.0
+0.9
+0.1
+0.2
+0.2
magnetic pulldown
30_nonmag_1
-0.0
+0.9
+0.3
+0.1
+0.2
magnetic pulldown
150_nonmag_1
+0.2
+0.9
+0.3
+0.1
+0.1
magnetic pulldown
150_nonmag_2
-0.4
+1.2
+0.5
+0.3
-0.0
magnetic pulldown
150_an_nonmag_1
-0.0
+1.5
+0.7
+0.0
+0.2
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AMB_RS03630
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