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Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS03240 and AMB_RS03245 are separated by 193 nucleotides
AMB_RS03245 and AMB_RS03250 are separated by 154 nucleotides
AMB_RS03250 and AMB_RS03255 are separated by 66 nucleotides
AMB_RS03255 and AMB_RS03260 are separated by 15 nucleotides
AMB_RS03240: AMB_RS03240 - DNA-binding response regulator, at 677,510 to 678,226
_RS03240
AMB_RS03245: AMB_RS03245 - 2-polyprenylphenol 6-hydroxylase, at 678,420 to 679,961
_RS03245
AMB_RS03250: AMB_RS03250 - bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE, at 680,116 to 680,874
_RS03250
AMB_RS03255: AMB_RS03255 - bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase, at 680,941 to 681,780
_RS03255
AMB_RS03260: AMB_RS03260 - hypothetical protein, at 681,796 to 682,155
_RS03260
Group
Condition
AMB
_RS03240
AMB
_RS03245
AMB
_RS03250
AMB
_RS03255
AMB
_RS03260
magnetic pulldown
30_an_initial_2
-0.3
N.D.
N.D.
-0.2
-0.3
magnetic pulldown
30_an_initial_1
-0.3
N.D.
N.D.
-0.1
-0.2
magnetic pulldown
30_an_mag_2
-0.4
N.D.
N.D.
+0.0
-0.2
magnetic pulldown
30_mag_2
-0.3
N.D.
N.D.
-0.1
-0.1
magnetic pulldown
30_an_mag_3
-0.2
N.D.
N.D.
-0.1
-0.2
magnetic pulldown
30_initial_2
-0.2
N.D.
N.D.
-0.2
-0.1
magnetic pulldown
30_initial_3
-0.1
N.D.
N.D.
-0.2
-0.1
magnetic pulldown
30_an_nonmag_1
-0.0
N.D.
N.D.
+0.2
-0.6
magnetic pulldown
30_an_initial_3
-0.1
N.D.
N.D.
-0.0
-0.3
magnetic pulldown
30_mag_1
-0.1
N.D.
N.D.
-0.2
-0.1
magnetic pulldown
150_mag_1
-0.3
N.D.
N.D.
+0.0
-0.0
magnetic pulldown
150_mag_3
-0.1
N.D.
N.D.
-0.1
-0.1
magnetic pulldown
150_initial_3
-0.2
N.D.
N.D.
-0.0
+0.1
magnetic pulldown
30_mag_3
-0.1
N.D.
N.D.
+0.1
-0.2
magnetic pulldown
150_nonmag_2
+0.7
N.D.
N.D.
+0.0
-0.9
magnetic pulldown
150_initial_1
-0.1
N.D.
N.D.
-0.2
+0.1
magnetic pulldown
30_an_nonmag_2
+0.1
N.D.
N.D.
-0.1
-0.1
magnetic pulldown
30_nonmag_1
+0.4
N.D.
N.D.
-0.1
-0.2
magnetic pulldown
30_nonmag_3
+0.4
N.D.
N.D.
-0.1
-0.2
magnetic pulldown
150_an_nonmag_2
+0.5
N.D.
N.D.
+0.2
-0.6
magnetic pulldown
150_an_nonmag_3
+0.5
N.D.
N.D.
-0.1
-0.2
carbon source
carbonsource_all
+0.4
N.D.
N.D.
+0.1
-0.2
magnetic pulldown
30_nonmag_2
+0.6
N.D.
N.D.
-0.3
-0.0
magnetic pulldown
without_iron2
+0.2
N.D.
N.D.
-0.0
+0.2
magnetic pulldown
without_iron3
+0.2
N.D.
N.D.
-0.0
+0.2
magnetic pulldown
150_nonmag_3
+0.9
N.D.
N.D.
-0.0
-0.3
magnetic pulldown
an_mag_3
+0.2
N.D.
N.D.
+0.1
+0.2
magnetic pulldown
150_nonmag_1
+0.7
N.D.
N.D.
-0.1
-0.1
carbon source
carbonsource_succinate
+0.3
N.D.
N.D.
-0.0
+0.3
magnetic pulldown
150_an_nonmag_1
+0.9
N.D.
N.D.
+0.2
-0.3
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