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Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS03205 and AMB_RS03210 are separated by 435 nucleotides
AMB_RS03210 and AMB_RS03215 are separated by 102 nucleotides
AMB_RS03215 and AMB_RS03220 are separated by 19 nucleotides
AMB_RS03220 and AMB_RS03225 are separated by 62 nucleotides
AMB_RS03205: AMB_RS03205 - DNA recombination/repair protein RecA, at 668,296 to 669,375
_RS03205
AMB_RS03210: AMB_RS03210 - DNA polymerase IV, at 669,811 to 670,992
_RS03210
AMB_RS03215: AMB_RS03215 - alpha/beta hydrolase, at 671,095 to 672,141
_RS03215
AMB_RS03220: AMB_RS03220 - two-component sensor histidine kinase, at 672,161 to 674,695
_RS03220
AMB_RS03225: AMB_RS03225 - DedA family protein, at 674,758 to 675,336
_RS03225
Group
Condition
AMB
_RS03205
AMB
_RS03210
AMB
_RS03215
AMB
_RS03220
AMB
_RS03225
magnetic pulldown
150_an_nonmag_2
-4.0
-0.6
-0.4
+0.1
N.D.
magnetic pulldown
30_an_nonmag_1
-3.8
-0.2
-0.8
+0.0
N.D.
magnetic pulldown
30_an_initial_1
-2.2
-0.5
-0.2
-0.2
N.D.
magnetic pulldown
30_an_nonmag_2
-2.1
-0.0
-0.6
-0.2
N.D.
magnetic pulldown
30_an_nonmag_3
-2.0
-0.1
-0.8
+0.0
N.D.
magnetic pulldown
30_an_mag_2
-2.3
-0.4
-0.1
+0.0
N.D.
magnetic pulldown
30_nonmag_3
-2.3
+0.1
-0.1
-0.1
N.D.
magnetic pulldown
30_an_mag_3
-1.4
-0.6
-0.4
-0.2
N.D.
magnetic pulldown
30_an_initial_2
-1.7
-0.6
-0.1
-0.0
N.D.
magnetic pulldown
150_an_nonmag_3
-1.5
-0.4
-0.4
-0.2
N.D.
magnetic pulldown
without_iron2
-2.3
-0.1
+0.1
-0.1
N.D.
magnetic pulldown
without_iron3
-2.0
+0.1
-0.2
-0.1
N.D.
carbon source
carbonsource_succinate
-1.9
-0.2
+0.1
-0.2
N.D.
magnetic pulldown
150_nonmag_3
-1.6
+0.1
-0.6
+0.1
N.D.
magnetic pulldown
150_an_nonmag_1
-0.8
-0.4
-0.8
-0.1
N.D.
magnetic pulldown
30_nonmag_1
-1.8
+0.1
-0.3
+0.0
N.D.
magnetic pulldown
150_mag_2
-1.8
+0.0
-0.1
-0.0
N.D.
magnetic pulldown
150_initial_2
-2.0
+0.1
+0.0
-0.0
N.D.
magnetic pulldown
30_an_mag_1
-0.6
-0.7
-0.4
-0.1
N.D.
magnetic pulldown
without_iron1
-1.5
+0.2
-0.3
-0.1
N.D.
magnetic pulldown
150_initial_1
-1.4
-0.0
-0.0
-0.2
N.D.
magnetic pulldown
30_an_initial_3
-0.8
-0.2
-0.3
-0.2
N.D.
magnetic pulldown
150_nonmag_1
-1.2
-0.1
-0.2
-0.0
N.D.
magnetic pulldown
30_mag_2
-1.3
+0.1
-0.1
-0.0
N.D.
magnetic pulldown
150_initial_3
-1.2
+0.1
+0.0
-0.2
N.D.
carbon source
carbonsource_all
-0.5
+0.2
-0.4
-0.4
N.D.
magnetic pulldown
30_initial_3
-1.0
+0.1
+0.0
+0.0
N.D.
magnetic pulldown
30_initial_1
-0.7
+0.2
-0.2
-0.0
N.D.
magnetic pulldown
30_initial_2
-0.9
+0.2
-0.0
+0.0
N.D.
magnetic pulldown
150_nonmag_2
+0.8
-0.2
-0.3
+0.1
N.D.
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