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Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS03080 and AMB_RS03085 are separated by 94 nucleotides
AMB_RS03085 and AMB_RS03090 are separated by 124 nucleotides
AMB_RS03090 and AMB_RS03095 are separated by 108 nucleotides
AMB_RS03095 and AMB_RS03100 overlap by 4 nucleotides
AMB_RS03080: AMB_RS03080 - prolyl aminopeptidase, at 643,903 to 644,844
_RS03080
AMB_RS03085: AMB_RS03085 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 644,939 to 645,976
_RS03085
AMB_RS03090: AMB_RS03090 - tRNA guanosine(34) transglycosylase Tgt, at 646,101 to 647,228
_RS03090
AMB_RS03095: AMB_RS03095 - tetratricopeptide repeat protein, at 647,337 to 647,840
_RS03095
AMB_RS03100: AMB_RS03100 - isoprenylcysteine carboxylmethyltransferase family protein, at 647,837 to 648,454
_RS03100
Group
Condition
AMB
_RS03080
AMB
_RS03085
AMB
_RS03090
AMB
_RS03095
AMB
_RS03100
magnetic pulldown
150_nonmag_2
+0.0
-0.5
-0.4
-0.5
-0.0
magnetic pulldown
150_nonmag_3
+0.1
-0.2
-0.5
-0.5
+0.1
magnetic pulldown
30_nonmag_2
-0.0
-0.6
-0.1
-0.2
+0.1
magnetic pulldown
150_mag_1
+0.2
-0.1
-0.5
-0.0
-0.1
magnetic pulldown
30_an_nonmag_3
-0.0
-0.0
-0.6
+0.5
-0.4
magnetic pulldown
without_iron1
+0.0
+0.0
-0.1
-0.4
-0.1
magnetic pulldown
150_an_nonmag_3
-0.1
+0.3
-0.7
+0.3
-0.4
magnetic pulldown
without_iron3
+0.1
+0.1
-0.4
-0.1
-0.0
magnetic pulldown
30_initial_2
+0.1
-0.2
+0.0
-0.3
-0.1
magnetic pulldown
30_mag_3
-0.0
-0.1
-0.1
-0.4
+0.1
magnetic pulldown
30_initial_1
+0.0
-0.0
-0.0
-0.4
+0.1
magnetic pulldown
30_initial_3
+0.0
+0.2
+0.2
-0.6
+0.0
magnetic pulldown
30_an_initial_1
+0.0
+0.3
-0.1
+0.1
-0.5
magnetic pulldown
30_an_initial_3
-0.1
+0.4
+0.0
-0.0
-0.4
magnetic pulldown
30_nonmag_3
+0.1
-0.2
+0.2
-0.3
+0.1
magnetic pulldown
30_mag_2
+0.1
-0.0
-0.3
+0.2
+0.0
magnetic pulldown
150_nonmag_1
+0.0
+0.1
-0.2
-0.1
+0.1
magnetic pulldown
without_iron2
+0.1
+0.0
+0.2
-0.4
+0.1
magnetic pulldown
30_an_mag_3
-0.0
+0.3
+0.1
+0.1
-0.4
carbon source
carbonsource_all
+0.1
-0.1
-0.1
+0.1
+0.2
magnetic pulldown
30_an_initial_2
-0.1
+0.2
+0.1
+0.3
-0.2
magnetic pulldown
150_an_nonmag_1
-0.1
+0.3
-0.3
+0.2
+0.1
magnetic pulldown
30_mag_1
+0.1
-0.1
+0.2
+0.2
+0.0
carbon source
carbonsource_succinate
+0.1
-0.1
+0.3
+0.1
-0.1
magnetic pulldown
30_an_nonmag_1
-0.6
+0.3
+0.6
+0.3
-0.2
magnetic pulldown
30_an_mag_1
+0.0
+0.4
+0.4
+0.3
-0.5
magnetic pulldown
30_an_nonmag_2
-0.0
+0.1
-0.1
+0.7
-0.1
magnetic pulldown
30_an_mag_2
+0.0
+0.5
+0.6
+0.2
-0.3
magnetic pulldown
an_mag_3
+0.6
+0.6
+0.6
-0.3
-0.2
magnetic pulldown
150_an_nonmag_2
+0.0
+0.5
+0.3
+0.8
-0.1
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