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Cofit
Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS02435 and AMB_RS23135 are separated by 2 nucleotides
AMB_RS23135 and AMB_RS02445 are separated by 1 nucleotides
AMB_RS02445 and AMB_RS23880 are separated by 181 nucleotides
AMB_RS23880 and AMB_RS23140 are separated by 64 nucleotides
AMB_RS02435: AMB_RS02435 - hypothetical protein, at 504,709 to 505,185
_RS02435
AMB_RS23135: AMB_RS23135 - DUF2163 domain-containing protein, at 505,188 to 506,078
_RS23135
AMB_RS02445: AMB_RS02445 - hydrolase, at 506,080 to 506,532
_RS02445
AMB_RS23880: AMB_RS23880 - RNA-binding protein, at 506,714 to 506,776
_RS23880
AMB_RS23140: AMB_RS23140 - hypothetical protein, at 506,841 to 509,726
_RS23140
Group
Condition
AMB
_RS02435
AMB
_RS23135
AMB
_RS02445
AMB
_RS23880
AMB
_RS23140
magnetic pulldown
an_mag_3
-0.3
-1.6
-0.6
N.D.
-0.1
magnetic pulldown
without_iron3
-0.1
+0.0
-0.4
N.D.
+0.0
magnetic pulldown
150_mag_2
-0.1
-0.0
-0.2
N.D.
+0.0
magnetic pulldown
30_an_mag_3
-0.2
+0.2
-0.1
N.D.
-0.2
magnetic pulldown
150_nonmag_3
-0.2
-0.1
+0.1
N.D.
-0.1
magnetic pulldown
30_initial_2
-0.2
+0.1
-0.2
N.D.
+0.0
magnetic pulldown
without_iron1
-0.1
+0.0
-0.1
N.D.
-0.1
magnetic pulldown
30_mag_1
-0.0
+0.1
-0.2
N.D.
-0.0
magnetic pulldown
30_nonmag_1
-0.1
+0.1
-0.2
N.D.
+0.1
magnetic pulldown
30_nonmag_3
-0.1
-0.1
+0.1
N.D.
+0.0
magnetic pulldown
30_an_mag_2
-0.3
+0.0
+0.3
N.D.
-0.1
magnetic pulldown
30_initial_3
-0.1
+0.2
+0.0
N.D.
+0.0
magnetic pulldown
30_an_mag_1
-0.3
+0.2
+0.3
N.D.
-0.1
magnetic pulldown
30_nonmag_2
-0.1
-0.0
+0.3
N.D.
-0.0
magnetic pulldown
150_nonmag_1
-0.1
+0.1
+0.1
N.D.
+0.0
magnetic pulldown
150_mag_1
+0.1
+0.1
-0.1
N.D.
+0.1
magnetic pulldown
30_an_nonmag_1
+0.0
+0.8
-0.6
N.D.
-0.0
magnetic pulldown
150_an_nonmag_3
-0.1
+0.3
+0.2
N.D.
-0.2
magnetic pulldown
150_initial_1
-0.0
+0.3
-0.2
N.D.
+0.1
carbon source
carbonsource_succinate
-0.2
+0.2
+0.2
N.D.
+0.1
magnetic pulldown
150_an_nonmag_2
+0.2
-0.0
-0.0
N.D.
+0.1
magnetic pulldown
30_an_initial_1
+0.0
+0.1
+0.2
N.D.
-0.1
magnetic pulldown
150_an_nonmag_1
+0.1
+0.3
+0.1
N.D.
-0.2
magnetic pulldown
150_initial_3
-0.1
+0.3
+0.1
N.D.
+0.1
magnetic pulldown
150_initial_2
+0.0
+0.1
+0.1
N.D.
+0.1
carbon source
carbonsource_all
+0.5
+0.2
-0.3
N.D.
+0.1
magnetic pulldown
30_an_initial_2
+0.0
+0.4
+0.1
N.D.
-0.1
magnetic pulldown
30_an_nonmag_3
+0.4
+0.1
-0.0
N.D.
-0.1
magnetic pulldown
30_an_nonmag_2
+0.4
+0.1
+0.1
N.D.
-0.2
magnetic pulldown
150_nonmag_2
+0.5
+0.3
+0.7
N.D.
+0.2
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