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Cofit
Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS01650 and AMB_RS01655 are separated by 170 nucleotides
AMB_RS01655 and AMB_RS01660 are separated by 62 nucleotides
AMB_RS01660 and AMB_RS01665 overlap by 4 nucleotides
AMB_RS01665 and AMB_RS01670 are separated by 4 nucleotides
AMB_RS01650: AMB_RS01650 - ATPase, at 363,896 to 366,556
_RS01650
AMB_RS01655: AMB_RS01655 - hypothetical protein, at 366,727 to 367,344
_RS01655
AMB_RS01660: AMB_RS01660 - class I SAM-dependent RNA methyltransferase, at 367,407 to 368,723
_RS01660
AMB_RS01665: AMB_RS01665 - ABC transporter, at 368,720 to 369,313
_RS01665
AMB_RS01670: AMB_RS01670 - MCE family protein, at 369,318 to 370,280
_RS01670
Group
Condition
AMB
_RS01650
AMB
_RS01655
AMB
_RS01660
AMB
_RS01665
AMB
_RS01670
magnetic pulldown
30_an_initial_3
-0.6
-2.1
-0.3
-0.1
+0.1
magnetic pulldown
30_an_mag_1
-0.2
-2.2
-0.2
+0.0
+0.1
magnetic pulldown
30_an_initial_2
-0.2
-1.9
-0.4
-0.1
+0.2
magnetic pulldown
an_mag_3
-2.4
-0.2
+0.1
+0.3
-0.2
magnetic pulldown
30_an_initial_1
-0.1
-2.0
-0.2
-0.1
+0.0
magnetic pulldown
30_an_mag_2
-0.3
-2.0
-0.1
-0.1
+0.2
magnetic pulldown
30_an_mag_3
+0.0
-2.1
-0.0
-0.0
+0.1
magnetic pulldown
150_an_nonmag_3
-0.5
-1.5
-0.1
+0.1
+0.0
magnetic pulldown
150_initial_1
-0.2
-1.2
-0.2
-0.1
-0.2
magnetic pulldown
30_an_nonmag_3
-0.3
-1.5
-0.1
+0.1
+0.0
magnetic pulldown
30_an_nonmag_1
-0.1
-1.0
-0.3
-0.0
-0.3
magnetic pulldown
30_an_nonmag_2
+0.1
-1.4
-0.3
-0.1
+0.0
magnetic pulldown
150_an_nonmag_1
-0.7
-1.2
+0.1
+0.4
+0.1
magnetic pulldown
30_mag_1
-0.3
-0.6
-0.3
+0.1
-0.1
magnetic pulldown
150_initial_2
-0.4
-0.5
+0.1
-0.0
-0.0
magnetic pulldown
without_iron2
-0.0
-0.9
+0.1
+0.0
-0.0
magnetic pulldown
150_an_nonmag_2
+0.1
-1.1
+0.2
-0.1
+0.2
magnetic pulldown
150_nonmag_2
+0.0
-0.3
-0.4
-0.4
+0.3
carbon source
carbonsource_succinate
-0.4
-0.2
-0.1
+0.0
-0.1
magnetic pulldown
150_mag_3
-0.1
-0.8
+0.3
-0.2
-0.0
magnetic pulldown
150_mag_1
-0.2
-0.5
-0.0
+0.0
+0.1
magnetic pulldown
150_mag_2
-0.4
-0.1
+0.2
-0.1
-0.1
magnetic pulldown
30_nonmag_2
+0.2
-0.7
-0.0
+0.2
-0.1
magnetic pulldown
150_nonmag_3
+0.4
-0.3
-0.4
+0.1
-0.0
magnetic pulldown
without_iron3
-0.1
+0.2
-0.2
-0.0
-0.0
magnetic pulldown
30_initial_1
-0.2
+0.1
-0.2
+0.1
-0.0
magnetic pulldown
30_nonmag_1
+0.3
-0.4
-0.2
+0.1
+0.1
carbon source
carbonsource_all
-0.0
-0.3
+0.5
-0.1
-0.1
magnetic pulldown
30_initial_3
-0.1
+0.2
+0.1
-0.1
+0.0
magnetic pulldown
30_nonmag_3
+0.1
+0.1
+0.1
-0.1
+0.2
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