Fitness for 5 genes in Magnetospirillum magneticum AMB-1

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Top 30 experiments (either direction), sorted by average fitness

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500 ntAMB_RS01085 and AMB_RS01090 overlap by 4 nucleotidesAMB_RS01090 and AMB_RS01095 overlap by 4 nucleotidesAMB_RS01095 and AMB_RS01100 are separated by 92 nucleotidesAMB_RS01100 and AMB_RS01105 overlap by 4 nucleotides AMB_RS01085: AMB_RS01085 - signal recognition particle-docking protein FtsY, at 241,552 to 242,550 _RS01085 AMB_RS01090: AMB_RS01090 - tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB, at 242,547 to 243,905 _RS01090 AMB_RS01095: AMB_RS01095 - diaminopimelate epimerase, at 243,902 to 244,756 _RS01095 AMB_RS01100: AMB_RS01100 - potassium/proton antiporter, at 244,849 to 246,642 _RS01100 AMB_RS01105: AMB_RS01105 - rhodanese-like domain-containing protein, at 246,639 to 247,049 _RS01105
Group Condition AMB_RS01085 AMB_RS01090 AMB_RS01095 AMB_RS01100 AMB_RS01105
magnetic pulldown 150_nonmag_2 N.D. N.D. N.D. -0.7 +0.2
magnetic pulldown without_iron1 N.D. N.D. N.D. -0.2 +0.1
magnetic pulldown 30_nonmag_3 N.D. N.D. N.D. -0.2 +0.2
magnetic pulldown without_iron3 N.D. N.D. N.D. -0.1 +0.1
magnetic pulldown 150_an_nonmag_2 N.D. N.D. N.D. +0.3 -0.2
magnetic pulldown 30_nonmag_2 N.D. N.D. N.D. -0.1 +0.2
carbon source carbonsource_all N.D. N.D. N.D. +0.2 -0.1
magnetic pulldown 30_initial_2 N.D. N.D. N.D. -0.1 +0.2
magnetic pulldown 150_initial_1 N.D. N.D. N.D. -0.0 +0.2
magnetic pulldown 30_mag_1 N.D. N.D. N.D. +0.2 +0.0
magnetic pulldown 30_an_mag_3 N.D. N.D. N.D. +0.2 -0.0
magnetic pulldown 30_mag_3 N.D. N.D. N.D. +0.1 +0.0
magnetic pulldown 30_an_mag_2 N.D. N.D. N.D. +0.1 +0.1
magnetic pulldown 30_mag_2 N.D. N.D. N.D. -0.0 +0.2
magnetic pulldown 30_initial_3 N.D. N.D. N.D. -0.0 +0.3
magnetic pulldown 30_initial_1 N.D. N.D. N.D. +0.1 +0.1
magnetic pulldown 150_nonmag_3 N.D. N.D. N.D. +0.1 +0.1
magnetic pulldown 150_initial_3 N.D. N.D. N.D. +0.3 +0.0
magnetic pulldown 30_an_mag_1 N.D. N.D. N.D. +0.3 +0.0
magnetic pulldown an_mag_3 N.D. N.D. N.D. -0.0 +0.4
carbon source carbonsource_succinate N.D. N.D. N.D. +0.2 +0.2
magnetic pulldown 30_an_nonmag_3 N.D. N.D. N.D. +0.2 +0.2
magnetic pulldown 150_mag_2 N.D. N.D. N.D. +0.3 +0.1
magnetic pulldown 30_an_nonmag_1 N.D. N.D. N.D. +0.1 +0.3
magnetic pulldown 150_mag_3 N.D. N.D. N.D. +0.1 +0.3
magnetic pulldown 150_an_nonmag_3 N.D. N.D. N.D. +0.4 +0.1
magnetic pulldown 150_mag_1 N.D. N.D. N.D. +0.3 +0.2
magnetic pulldown 150_nonmag_1 N.D. N.D. N.D. +0.3 +0.2
magnetic pulldown 30_an_nonmag_2 N.D. N.D. N.D. +0.4 +0.2
magnetic pulldown 30_an_initial_2 N.D. N.D. N.D. +0.4 +0.2
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AMB_RS01085
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AMB_RS01090
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AMB_RS01100
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AMB_RS01105
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