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Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS00855 and AMB_RS00860 are separated by 31 nucleotides
AMB_RS00860 and AMB_RS00865 overlap by 4 nucleotides
AMB_RS00865 and AMB_RS00870 are separated by 200 nucleotides
AMB_RS00870 and AMB_RS00875 are separated by 10 nucleotides
AMB_RS00855: AMB_RS00855 - helix-turn-helix domain-containing protein, at 191,240 to 192,112
_RS00855
AMB_RS00860: AMB_RS00860 - NADH-quinone oxidoreductase subunit F, at 192,144 to 193,736
_RS00860
AMB_RS00865: AMB_RS00865 - formate dehydrogenase subunit alpha, at 193,733 to 196,408
_RS00865
AMB_RS00870: AMB_RS00870 - DUF4863 domain-containing protein, at 196,609 to 197,079
_RS00870
AMB_RS00875: AMB_RS00875 - alpha/beta hydrolase, at 197,090 to 197,878
_RS00875
Group
Condition
AMB
_RS00855
AMB
_RS00860
AMB
_RS00865
AMB
_RS00870
AMB
_RS00875
magnetic pulldown
30_an_nonmag_1
-1.4
+0.0
+0.2
N.D.
-0.1
magnetic pulldown
150_nonmag_2
-0.9
+0.3
+0.3
N.D.
-0.4
magnetic pulldown
150_nonmag_3
-0.9
+0.3
-0.1
N.D.
+0.2
magnetic pulldown
without_iron3
-0.4
+0.0
+0.1
N.D.
+0.1
magnetic pulldown
without_iron1
-0.5
+0.1
+0.1
N.D.
+0.0
magnetic pulldown
30_mag_3
-0.3
-0.2
+0.1
N.D.
+0.1
magnetic pulldown
30_nonmag_3
-0.6
+0.2
+0.1
N.D.
+0.1
magnetic pulldown
150_nonmag_1
-0.8
+0.2
+0.1
N.D.
+0.2
magnetic pulldown
30_nonmag_1
-0.5
+0.3
+0.1
N.D.
-0.0
magnetic pulldown
without_iron2
-0.5
+0.1
+0.1
N.D.
+0.1
magnetic pulldown
30_mag_1
-0.2
-0.1
+0.1
N.D.
+0.1
carbon source
carbonsource_all
-0.3
-0.1
+0.1
N.D.
+0.2
magnetic pulldown
30_initial_2
-0.4
+0.2
+0.1
N.D.
+0.0
magnetic pulldown
30_initial_3
-0.4
+0.2
+0.2
N.D.
+0.0
magnetic pulldown
150_mag_2
-0.2
-0.0
+0.1
N.D.
+0.2
magnetic pulldown
30_initial_1
-0.4
+0.1
+0.1
N.D.
+0.3
magnetic pulldown
150_initial_2
-0.3
+0.2
+0.2
N.D.
+0.0
magnetic pulldown
150_initial_1
-0.3
+0.1
+0.3
N.D.
+0.2
magnetic pulldown
150_initial_3
-0.1
+0.1
+0.2
N.D.
+0.2
magnetic pulldown
30_nonmag_2
-0.7
+0.3
+0.6
N.D.
+0.2
magnetic pulldown
30_an_mag_1
+0.3
-0.3
+0.1
N.D.
+0.2
magnetic pulldown
150_an_nonmag_3
-0.2
+0.3
-0.1
N.D.
+0.4
magnetic pulldown
150_an_nonmag_2
-0.4
+0.1
+0.4
N.D.
+0.3
magnetic pulldown
30_an_initial_1
+0.3
+0.0
+0.1
N.D.
+0.0
magnetic pulldown
150_mag_1
-0.0
+0.0
+0.2
N.D.
+0.3
magnetic pulldown
30_an_mag_3
+0.5
-0.1
+0.1
N.D.
+0.1
magnetic pulldown
30_an_initial_2
+0.5
+0.1
+0.1
N.D.
+0.1
magnetic pulldown
30_an_initial_3
+0.3
+0.1
+0.2
N.D.
+0.2
magnetic pulldown
150_an_nonmag_1
-0.1
+0.5
+0.4
N.D.
+0.1
magnetic pulldown
30_an_mag_2
+0.5
-0.1
+0.2
N.D.
+0.3
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