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Cofit
Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS00710 and AMB_RS00715 are separated by 12 nucleotides
AMB_RS00715 and AMB_RS00720 are separated by 144 nucleotides
AMB_RS00720 and AMB_RS00725 overlap by 4 nucleotides
AMB_RS00725 and AMB_RS00730 are separated by 3 nucleotides
AMB_RS00710: AMB_RS00710 - cupin domain-containing protein, at 162,000 to 162,479
_RS00710
AMB_RS00715: AMB_RS00715 - glycosyltransferase family 2 protein, at 162,492 to 163,199
_RS00715
AMB_RS00720: AMB_RS00720 - hypothetical protein, at 163,344 to 165,542
_RS00720
AMB_RS00725: AMB_RS00725 - glycosyltransferase family 9 protein, at 165,539 to 166,516
_RS00725
AMB_RS00730: AMB_RS00730 - nucleotide sugar dehydrogenase, at 166,520 to 167,791
_RS00730
Group
Condition
AMB
_RS00710
AMB
_RS00715
AMB
_RS00720
AMB
_RS00725
AMB
_RS00730
magnetic pulldown
30_an_nonmag_3
-0.9
-0.6
+0.0
N.D.
N.D.
magnetic pulldown
30_an_nonmag_1
-0.9
-0.2
+0.2
N.D.
N.D.
magnetic pulldown
30_nonmag_3
-0.5
-0.4
+0.1
N.D.
N.D.
magnetic pulldown
150_an_nonmag_1
-0.9
+0.1
+0.0
N.D.
N.D.
magnetic pulldown
150_nonmag_1
-0.3
-0.5
+0.1
N.D.
N.D.
magnetic pulldown
150_an_nonmag_2
-0.6
-0.1
-0.0
N.D.
N.D.
magnetic pulldown
150_nonmag_3
-0.6
-0.2
+0.1
N.D.
N.D.
magnetic pulldown
30_nonmag_2
-0.3
-0.6
+0.1
N.D.
N.D.
magnetic pulldown
30_nonmag_1
-0.4
-0.3
+0.0
N.D.
N.D.
carbon source
carbonsource_all
-0.4
-0.3
+0.1
N.D.
N.D.
magnetic pulldown
30_an_nonmag_2
-0.5
-0.2
+0.1
N.D.
N.D.
magnetic pulldown
150_an_nonmag_3
-0.6
-0.2
+0.1
N.D.
N.D.
carbon source
carbonsource_succinate
-0.4
-0.1
-0.1
N.D.
N.D.
magnetic pulldown
30_an_initial_1
-0.4
-0.3
+0.1
N.D.
N.D.
magnetic pulldown
30_an_mag_3
-0.2
-0.4
+0.2
N.D.
N.D.
magnetic pulldown
150_initial_2
-0.3
-0.2
+0.1
N.D.
N.D.
magnetic pulldown
30_an_initial_3
-0.2
-0.3
+0.1
N.D.
N.D.
magnetic pulldown
without_iron1
-0.2
-0.2
+0.0
N.D.
N.D.
magnetic pulldown
30_initial_1
-0.1
-0.3
+0.1
N.D.
N.D.
magnetic pulldown
150_initial_1
-0.2
-0.2
+0.1
N.D.
N.D.
magnetic pulldown
30_initial_2
-0.1
-0.2
+0.0
N.D.
N.D.
magnetic pulldown
30_mag_1
-0.2
-0.2
+0.1
N.D.
N.D.
magnetic pulldown
150_mag_2
-0.2
-0.2
+0.1
N.D.
N.D.
magnetic pulldown
30_an_mag_1
-0.1
-0.3
+0.1
N.D.
N.D.
magnetic pulldown
150_nonmag_2
-0.3
+0.2
-0.2
N.D.
N.D.
magnetic pulldown
150_initial_3
-0.2
-0.0
+0.1
N.D.
N.D.
magnetic pulldown
30_mag_3
+0.1
-0.2
+0.1
N.D.
N.D.
magnetic pulldown
30_mag_2
+0.0
-0.1
+0.2
N.D.
N.D.
magnetic pulldown
30_an_initial_2
-0.1
-0.1
+0.3
N.D.
N.D.
magnetic pulldown
an_mag_3
+0.3
-0.0
+0.1
N.D.
N.D.
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