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Protein
Homologs
Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS00550 and AMB_RS00555 overlap by 4 nucleotides
AMB_RS00555 and AMB_RS00560 are separated by 8 nucleotides
AMB_RS00560 and AMB_RS00565 are separated by 121 nucleotides
AMB_RS00565 and AMB_RS23095 are separated by 1879 nucleotides
AMB_RS00550: AMB_RS00550 - DUF751 domain-containing protein, at 125,307 to 127,205
_RS00550
AMB_RS00555: AMB_RS00555 - glycosyltransferase, at 127,202 to 128,143
_RS00555
AMB_RS00560: AMB_RS00560 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 128,152 to 129,339
_RS00560
AMB_RS00565: AMB_RS00565 - acyltransferase, at 129,461 to 130,039
_RS00565
AMB_RS23095: AMB_RS23095 - class I SAM-dependent methyltransferase, at 131,919 to 132,917
_RS23095
Group
Condition
AMB
_RS00550
AMB
_RS00555
AMB
_RS00560
AMB
_RS00565
AMB
_RS23095
magnetic pulldown
30_an_nonmag_2
N.D.
N.D.
N.D.
N.D.
-2.9
magnetic pulldown
30_an_nonmag_3
N.D.
N.D.
N.D.
N.D.
-2.5
magnetic pulldown
150_an_nonmag_3
N.D.
N.D.
N.D.
N.D.
-2.2
magnetic pulldown
150_an_nonmag_2
N.D.
N.D.
N.D.
N.D.
-2.1
magnetic pulldown
150_an_nonmag_1
N.D.
N.D.
N.D.
N.D.
-2.0
magnetic pulldown
30_an_nonmag_1
N.D.
N.D.
N.D.
N.D.
-1.5
magnetic pulldown
30_an_initial_2
N.D.
N.D.
N.D.
N.D.
-1.2
magnetic pulldown
150_nonmag_2
N.D.
N.D.
N.D.
N.D.
-1.0
magnetic pulldown
30_an_initial_3
N.D.
N.D.
N.D.
N.D.
-1.0
magnetic pulldown
30_an_initial_1
N.D.
N.D.
N.D.
N.D.
-0.9
magnetic pulldown
150_nonmag_3
N.D.
N.D.
N.D.
N.D.
-0.8
magnetic pulldown
150_nonmag_1
N.D.
N.D.
N.D.
N.D.
-0.7
magnetic pulldown
30_an_mag_3
N.D.
N.D.
N.D.
N.D.
-0.6
magnetic pulldown
30_an_mag_1
N.D.
N.D.
N.D.
N.D.
-0.6
magnetic pulldown
30_nonmag_3
N.D.
N.D.
N.D.
N.D.
-0.5
magnetic pulldown
30_an_mag_2
N.D.
N.D.
N.D.
N.D.
-0.5
magnetic pulldown
150_initial_1
N.D.
N.D.
N.D.
N.D.
-0.5
magnetic pulldown
30_nonmag_1
N.D.
N.D.
N.D.
N.D.
-0.5
magnetic pulldown
150_initial_2
N.D.
N.D.
N.D.
N.D.
-0.4
magnetic pulldown
150_initial_3
N.D.
N.D.
N.D.
N.D.
-0.4
magnetic pulldown
150_mag_2
N.D.
N.D.
N.D.
N.D.
-0.4
magnetic pulldown
30_initial_3
N.D.
N.D.
N.D.
N.D.
-0.4
magnetic pulldown
150_mag_1
N.D.
N.D.
N.D.
N.D.
-0.4
magnetic pulldown
30_initial_1
N.D.
N.D.
N.D.
N.D.
-0.3
magnetic pulldown
150_mag_3
N.D.
N.D.
N.D.
N.D.
-0.3
carbon source
carbonsource_succinate
N.D.
N.D.
N.D.
N.D.
-0.2
magnetic pulldown
30_nonmag_2
N.D.
N.D.
N.D.
N.D.
-0.2
magnetic pulldown
30_mag_2
N.D.
N.D.
N.D.
N.D.
-0.2
magnetic pulldown
30_mag_1
N.D.
N.D.
N.D.
N.D.
-0.1
magnetic pulldown
without_iron1
N.D.
N.D.
N.D.
N.D.
+0.2
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