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Fitness for 5 genes in
Magnetospirillum magneticum AMB-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AMB_RS00255 and AMB_RS00260 overlap by 23 nucleotides
AMB_RS00260 and AMB_RS00265 overlap by 4 nucleotides
AMB_RS00265 and AMB_RS00270 overlap by 71 nucleotides
AMB_RS00270 and AMB_RS00275 overlap by 8 nucleotides
AMB_RS00255: AMB_RS00255 - methyltransferase, TIGR04325 family, at 56,681 to 57,454
_RS00255
AMB_RS00260: AMB_RS00260 - class I SAM-dependent methyltransferase, at 57,432 to 58,802
_RS00260
AMB_RS00265: AMB_RS00265 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 58,799 to 59,899
_RS00265
AMB_RS00270: AMB_RS00270 - hypothetical protein, at 59,829 to 60,560
_RS00270
AMB_RS00275: AMB_RS00275 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 60,553 to 61,668
_RS00275
Group
Condition
AMB
_RS00255
AMB
_RS00260
AMB
_RS00265
AMB
_RS00270
AMB
_RS00275
magnetic pulldown
150_nonmag_3
-0.4
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
150_an_nonmag_3
-0.4
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
30_an_nonmag_2
-0.3
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
150_an_nonmag_1
-0.3
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
30_an_nonmag_3
-0.3
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
150_initial_1
-0.3
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
30_initial_3
-0.3
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
150_nonmag_2
-0.3
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
30_nonmag_2
-0.3
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
30_nonmag_1
-0.2
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
150_nonmag_1
-0.2
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
150_initial_3
-0.2
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
30_initial_1
-0.2
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
30_an_initial_3
-0.2
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
150_initial_2
-0.2
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
without_iron3
-0.1
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
without_iron2
-0.1
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
30_an_initial_1
-0.1
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
30_mag_1
-0.1
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
150_mag_3
-0.1
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
30_initial_2
-0.1
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
an_mag_3
-0.1
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
30_nonmag_3
-0.1
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
30_mag_3
-0.1
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
30_mag_2
-0.1
N.D.
N.D.
N.D.
N.D.
carbon source
carbonsource_succinate
-0.1
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
150_mag_1
-0.1
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
without_iron1
-0.1
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
30_an_initial_2
-0.1
N.D.
N.D.
N.D.
N.D.
magnetic pulldown
30_an_mag_2
+0.1
N.D.
N.D.
N.D.
N.D.
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