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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS22110 and ABZR88_RS22115 are separated by 106 nucleotides
ABZR88_RS22115 and ABZR88_RS22120 are separated by 44 nucleotides
ABZR88_RS22120 and ABZR88_RS22125 are separated by 202 nucleotides
ABZR88_RS22125 and ABZR88_RS22130 are separated by 3 nucleotides
ABZR88_RS22110: ABZR88_RS22110 - universal stress protein, at 5,298,319 to 5,298,792
_RS22110
ABZR88_RS22115: ABZR88_RS22115 - NADPH dehydrogenase NamA, at 5,298,899 to 5,299,972
_RS22115
ABZR88_RS22120: ABZR88_RS22120 - OsmC family protein, at 5,300,017 to 5,300,436
_RS22120
ABZR88_RS22125: ABZR88_RS22125 - hypothetical protein, at 5,300,639 to 5,301,724
_RS22125
ABZR88_RS22130: ABZR88_RS22130 - MBOAT family protein, at 5,301,728 to 5,303,143
_RS22130
Group
Condition
ABZR88
_RS22110
ABZR88
_RS22115
ABZR88
_RS22120
ABZR88
_RS22125
ABZR88
_RS22130
stress
potassium fluoride stress 30 mM
-1.3
-0.4
N.D.
-0.0
-0.4
stress
potassium fluoride stress 30 mM
-1.2
-0.2
N.D.
-0.1
-0.5
carbon source
L-Arabinose (C)
-0.2
-0.3
N.D.
-0.2
-0.3
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.2
-0.3
N.D.
-0.3
-0.1
carbon source
Starch (C)
+0.0
-0.1
N.D.
-0.3
-0.4
stress
NaCl stress 100 mM
+0.1
+0.0
N.D.
-0.4
-0.4
carbon source
D-Maltose (C)
+0.3
-0.2
N.D.
-0.3
-0.4
stress
Kanamycin sulfate stress 0.05 mg/ml
+0.0
-0.2
N.D.
-0.3
-0.1
carbon source
alginate (C)
+0.3
-0.3
N.D.
-0.2
-0.2
carbon source
Pullulan (C)
-0.1
-0.3
N.D.
-0.2
+0.0
carbon source
Starch (C)
+0.2
-0.1
N.D.
-0.2
-0.3
stress
R2A with Apigenin 50 ug/ml
+0.1
-0.0
N.D.
-0.1
-0.3
carbon source
D-Glucose (C)
+0.0
+0.1
N.D.
-0.4
-0.1
stress
R2A_low_K2HPO4
-0.1
+0.1
N.D.
-0.2
-0.1
carbon source
D-Glucose (C)
+0.1
+0.1
N.D.
-0.3
-0.1
carbon source
L-Arabinose (C)
-0.0
-0.2
N.D.
+0.1
-0.2
stress
Kanamycin sulfate stress 0.05 mg/ml
+0.2
-0.1
N.D.
-0.2
-0.1
carbon source
L-Rhamnose (C)
-0.1
-0.3
N.D.
-0.1
+0.3
temperature
R2A 15C; 72 hours
+0.1
+0.2
N.D.
-0.2
-0.3
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.1
+0.1
N.D.
-0.2
-0.2
stress
R2A_low_K2HPO4
+0.2
+0.1
N.D.
-0.3
+0.0
no stress control
R2A no stress control
-0.1
+0.2
N.D.
-0.3
+0.2
temperature
R2A 15C; 72 hours
+0.3
+0.2
N.D.
-0.3
-0.2
temperature
R2A 21C
-0.2
+0.3
N.D.
-0.0
-0.0
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
+0.0
+0.1
N.D.
-0.1
+0.2
motility_chemotaxis
R2A motility; outer cut
+0.3
-0.0
N.D.
+0.3
-0.3
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
-0.1
+0.0
N.D.
+0.1
+0.3
temperature
R2A 15C; 144 hours
+0.3
+0.3
N.D.
-0.0
-0.2
temperature
R2A 30C; 144 hours
+0.3
+0.2
N.D.
+0.1
-0.1
motility_chemotaxis
R2A motility; outer cut
+0.2
+0.5
N.D.
-0.2
+0.2
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