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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS21890 and ABZR88_RS21895 are separated by 7 nucleotides
ABZR88_RS21895 and ABZR88_RS21900 are separated by 368 nucleotides
ABZR88_RS21900 and ABZR88_RS21905 overlap by 20 nucleotides
ABZR88_RS21905 and ABZR88_RS21910 are separated by 173 nucleotides
ABZR88_RS21890: ABZR88_RS21890 - sugar phosphate isomerase/epimerase, at 5,253,464 to 5,254,381
_RS21890
ABZR88_RS21895: ABZR88_RS21895 - Gfo/Idh/MocA family protein, at 5,254,389 to 5,255,498
_RS21895
ABZR88_RS21900: ABZR88_RS21900 - molybdopterin-dependent oxidoreductase, at 5,255,867 to 5,256,646
_RS21900
ABZR88_RS21905: ABZR88_RS21905 - cytochrome b/b6 domain-containing protein, at 5,256,627 to 5,257,316
_RS21905
ABZR88_RS21910: ABZR88_RS21910 - MBL fold metallo-hydrolase, at 5,257,490 to 5,258,248
_RS21910
Group
Condition
ABZR88
_RS21890
ABZR88
_RS21895
ABZR88
_RS21900
ABZR88
_RS21905
ABZR88
_RS21910
carbon source
alginate (C)
-0.0
+0.1
+0.1
-0.4
-0.3
carbon source
Starch (C)
+0.1
-0.0
+0.1
-0.2
-0.3
carbon source
L-Arabinose (C)
+0.2
-0.1
+0.1
-0.4
-0.1
no stress control
R2A no stress control
-0.1
-0.3
+0.1
+0.2
-0.1
carbon source
D-Glucose (C)
-0.0
+0.1
+0.3
-0.3
+0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.1
-0.2
+0.3
-0.2
+0.0
stress
Kanamycin sulfate stress 0.05 mg/ml
+0.2
-0.0
+0.2
-0.3
+0.1
carbon source
Melibiose (C)
+0.1
+0.2
+0.1
-0.3
+0.1
carbon source
L-Rhamnose (C)
+0.3
-0.2
+0.2
-0.1
+0.0
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
-0.1
+0.5
-0.2
+0.4
-0.3
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
+0.1
+0.2
+0.2
-0.3
+0.1
carbon source
L-Rhamnose (C)
-0.2
+0.2
+0.3
-0.2
+0.1
stress
potassium fluoride stress 30 mM
-0.0
+0.4
+0.1
-0.2
+0.1
carbon source
D-Xylose (C)
+0.1
+0.1
+0.3
-0.1
-0.1
stress
Quercetin stress 0.05 mg/ml
+0.2
+0.3
+0.3
-0.2
-0.2
stress
R2A_high_K2HPO4
-0.0
+0.2
+0.1
-0.2
+0.2
carbon source
Pullulan (C)
+0.2
+0.1
+0.1
+0.1
-0.2
stress
Kanamycin sulfate stress 0.05 mg/ml
+0.3
+0.1
+0.1
-0.3
+0.3
carbon source
Melibiose (C)
+0.2
+0.2
+0.2
+0.1
-0.1
stress
copper (II) chloride stress 1 mM
+0.2
+0.1
+0.2
+0.2
-0.2
stress
Erythromycin stress 0.05 mg/ml
+0.1
+0.2
+0.3
+0.1
-0.3
motility_chemotaxis
R2A motility; outer cut
+0.3
+0.3
-0.0
+0.0
-0.1
carbon source
L-Arabinose (C)
-0.1
+0.4
+0.1
+0.3
-0.0
temperature
R2A 15C; 144 hours
+0.4
+0.2
+0.1
-0.1
+0.2
carbon source
Beta-Lactose (C)
+0.4
+0.2
+0.2
+0.2
-0.1
temperature
R2A 15C; 72 hours
+0.2
+0.5
+0.3
-0.2
+0.1
temperature
R2A 15C; 72 hours
+0.2
+0.5
+0.3
-0.1
+0.1
temperature
R2A 15C; 144 hours
+0.4
+0.6
+0.2
+0.2
+0.2
motility_chemotaxis
R2A motility; outer cut
+0.4
+0.4
+0.4
+0.1
+0.4
motility_chemotaxis
R2A motility; outer cut
+0.7
-0.0
+0.4
+0.3
+0.3
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ABZR88_RS21900
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