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Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS21545 and ABZR88_RS21550 are separated by 185 nucleotides
ABZR88_RS21550 and ABZR88_RS21555 are separated by 23 nucleotides
ABZR88_RS21555 and ABZR88_RS21560 are separated by 293 nucleotides
ABZR88_RS21560 and ABZR88_RS21565 are separated by 59 nucleotides
ABZR88_RS21545: ABZR88_RS21545 - rhamnogalacturonan acetylesterase, at 5,176,475 to 5,177,266
_RS21545
ABZR88_RS21550: ABZR88_RS21550 - PPC domain-containing DNA-binding protein, at 5,177,452 to 5,177,970
_RS21550
ABZR88_RS21555: ABZR88_RS21555 - TlpA disulfide reductase family protein, at 5,177,994 to 5,179,118
_RS21555
ABZR88_RS21560: ABZR88_RS21560 - alpha/beta hydrolase fold domain-containing protein, at 5,179,412 to 5,180,137
_RS21560
ABZR88_RS21565: ABZR88_RS21565 - S1/P1 nuclease, at 5,180,197 to 5,180,982
_RS21565
Group
Condition
ABZR88
_RS21545
ABZR88
_RS21550
ABZR88
_RS21555
ABZR88
_RS21560
ABZR88
_RS21565
motility_chemotaxis
R2A motility; outer cut
-0.0
-0.7
+0.1
-0.1
-0.4
carbon source
Beta-Lactose (C)
-0.1
-0.4
-0.0
+0.0
-0.3
carbon source
Starch (C)
-0.1
-0.6
-0.0
+0.1
-0.2
stress
Erythromycin stress 0.05 mg/ml
-0.4
-0.1
-0.0
+0.1
-0.4
stress
Quercetin stress 0.05 mg/ml
+0.0
-0.6
-0.2
+0.2
-0.1
carbon source
alginate (C)
+0.4
-0.8
+0.2
+0.1
-0.5
carbon source
D-Maltose (C)
-0.0
-0.4
-0.1
+0.2
-0.3
carbon source
D-Maltose (C)
-0.2
-0.5
+0.2
+0.1
-0.1
carbon source
Beta-Lactose (C)
+0.3
-0.4
+0.1
+0.1
-0.6
stress
Kanamycin sulfate stress 0.05 mg/ml
-0.1
-0.3
+0.0
+0.1
-0.2
temperature
R2A 15C; 144 hours
-0.2
-0.3
-0.2
+0.2
+0.1
stress
Esculin Monohydrate stress 5 mM
+0.1
-0.5
-0.0
+0.2
-0.1
stress
potassium fluoride stress 30 mM
-0.0
-0.3
-0.1
+0.3
-0.0
carbon source
D-Glucose (C)
+0.2
-0.2
-0.1
+0.1
-0.3
carbon source
Starch (C)
+0.1
-0.2
+0.1
+0.2
-0.4
carbon source
L-Arabinose (C)
+0.2
-0.1
-0.0
+0.2
-0.4
temperature
R2A 21C
+0.1
-0.2
-0.0
+0.2
-0.2
temperature
R2A 15C; 72 hours
+0.2
-0.2
-0.4
-0.0
+0.3
temperature
R2A 30C; 144 hours
+0.1
-0.2
-0.3
+0.1
+0.3
carbon source
D-Xylose (C)
+0.1
-0.3
+0.1
+0.3
-0.2
carbon source
Pullulan (C)
+0.0
-0.4
+0.4
+0.0
-0.0
stress
copper (II) chloride stress 1 mM
+0.1
-0.2
+0.1
+0.2
-0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.3
-0.5
+0.2
+0.1
+0.1
temperature
R2A 30C
-0.2
-0.2
+0.1
+0.3
+0.2
carbon source
Pullulan (C)
+0.1
-0.5
+0.1
+0.3
+0.2
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
+0.5
-0.2
+0.5
-0.0
-0.4
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
+0.1
+0.2
-0.1
+0.3
-0.1
stress
R2A with Apigenin 50 ug/ml
+0.0
-0.2
-0.0
+0.2
+0.3
no stress control
R2A no stress control
+0.2
+0.3
-0.0
-0.1
+0.3
motility_chemotaxis
R2A motility; outer cut
+0.2
+0.3
-0.1
+0.3
+0.4
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ABZR88_RS21555
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