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Cofit
Protein
Homologs
Fitness for 5 genes in
Mucilaginibacter yixingensis YX-36 DSM 26809
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR88_RS20870 and ABZR88_RS20875 overlap by 4 nucleotides
ABZR88_RS20875 and ABZR88_RS20880 are separated by 39 nucleotides
ABZR88_RS20880 and ABZR88_RS20885 are separated by 134 nucleotides
ABZR88_RS20885 and ABZR88_RS20890 are separated by 16 nucleotides
ABZR88_RS20870: ABZR88_RS20870 - addiction module protein, at 5,048,886 to 5,049,128
_RS20870
ABZR88_RS20875: ABZR88_RS20875 - type II toxin-antitoxin system RelE/ParE family toxin, at 5,049,125 to 5,049,430
_RS20875
ABZR88_RS20880: ABZR88_RS20880 - hypothetical protein, at 5,049,470 to 5,050,021
_RS20880
ABZR88_RS20885: ABZR88_RS20885 - ferrochelatase, at 5,050,156 to 5,051,175
_RS20885
ABZR88_RS20890: ABZR88_RS20890 - hypothetical protein, at 5,051,192 to 5,051,602
_RS20890
Group
Condition
ABZR88
_RS20870
ABZR88
_RS20875
ABZR88
_RS20880
ABZR88
_RS20885
ABZR88
_RS20890
temperature
R2A 15C; 144 hours
N.D.
-0.3
-0.8
N.D.
-0.5
temperature
R2A 15C; 72 hours
N.D.
+0.1
-0.6
N.D.
-0.4
motility_chemotaxis
R2A motility; outer cut
N.D.
-0.0
-0.7
N.D.
-0.1
temperature
R2A 15C; 72 hours
N.D.
+0.1
-0.8
N.D.
-0.0
stress
R2A_high_K2HPO4
N.D.
+0.1
-0.2
N.D.
-0.5
temperature
R2A 15C; 144 hours
N.D.
+0.3
-0.4
N.D.
-0.4
in planta
Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=7_days
N.D.
+0.3
-0.5
N.D.
-0.1
stress
R2A_low_K2HPO4
N.D.
+0.3
-0.0
N.D.
-0.4
no stress control
R2A no stress control
N.D.
+0.4
-0.2
N.D.
-0.4
stress
R2A_low_K2HPO4
N.D.
+0.3
+0.1
N.D.
-0.4
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
N.D.
+0.4
+0.3
N.D.
-0.6
stress
Kanamycin sulfate stress 0.05 mg/ml
N.D.
+0.2
+0.4
N.D.
-0.4
stress
R2A_high_K2HPO4
N.D.
+0.5
+0.3
N.D.
-0.4
carbon source
L-Arabinose (C)
N.D.
+0.1
+0.5
N.D.
-0.2
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
N.D.
+0.6
-0.3
N.D.
+0.2
stress
copper (II) chloride stress 1 mM
N.D.
+0.2
-0.1
N.D.
+0.5
carbon source
Beta-Lactose (C)
N.D.
-0.2
+0.3
N.D.
+0.6
carbon source
Starch (C)
N.D.
+0.2
-0.1
N.D.
+0.6
carbon source
D-Maltose (C)
N.D.
+0.4
-0.2
N.D.
+0.4
carbon source
Pullulan (C)
N.D.
+0.2
+0.5
N.D.
-0.1
stress
R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
N.D.
+0.4
+0.3
N.D.
-0.0
stress
potassium fluoride stress 30 mM
N.D.
+0.2
+0.4
N.D.
+0.2
carbon source
Starch (C)
N.D.
+0.4
-0.2
N.D.
+0.6
carbon source
D-Xylose (C)
N.D.
+0.4
+0.3
N.D.
+0.2
carbon source
D-Glucose (C)
N.D.
+0.3
+0.4
N.D.
+0.3
carbon source
Beta-Lactose (C)
N.D.
+0.3
+0.4
N.D.
+0.2
carbon source
alginate (C)
N.D.
+0.3
+0.2
N.D.
+0.5
carbon source
D-Maltose (C)
N.D.
+0.4
+0.3
N.D.
+0.4
carbon source
D-Xylose (C)
N.D.
+0.3
+0.5
N.D.
+0.4
stress
R2A with Apigenin 50 ug/ml
N.D.
+0.7
+0.2
N.D.
+0.4
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